Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P03
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    25   0.38 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   6.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   6.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.1  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = -3

Query: 569 KLFHSRNIPNILLQSSYKMCNYFETHVHS--NYERNTKGDASRRLR*WFYCVHNSVKYSS 396
           KL   R I +  L+   + CN F THV +    +  T+    + +      +H   K+SS
Sbjct: 150 KLAQIRQIYHQELEKYEQACNEFTTHVMNLLREQSRTRPITPKEIERMVQIIHK--KFSS 207

Query: 395 SCVHSKQQSC 366
             +  KQ +C
Sbjct: 208 IQMQLKQSTC 217


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 562 FTVETYQIYCYKAVIKCV 509
           F   TY IY + A +KC+
Sbjct: 48  FKTRTYFIYAFVAPVKCL 65


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 562 FTVETYQIYCYKAVIKCV 509
           F   TY IY + A +KC+
Sbjct: 281 FKTRTYFIYAFVAPVKCL 298


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 562 FTVETYQIYCYKAVIKCV 509
           F   TY IY + A +KC+
Sbjct: 281 FKTRTYFIYAFVAPVKCL 298


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = -1

Query: 550 TYQIYCYKAVIKCVTTLKPMY 488
           TYQ+YC+ + +K ++ L+ ++
Sbjct: 545 TYQLYCWSSFLK-ISVLQSLW 564


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -3

Query: 578 PITKLFHSRNIPNILLQSSYKMCNYFETHVH 486
           P   +FH  + PNI         N F T+ H
Sbjct: 185 PQMVVFHVESHPNITWYQQCVTYNVFPTYAH 215



 Score = 21.4 bits (43), Expect = 6.1
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -2

Query: 90  WTPYFMFC 67
           WTPY++ C
Sbjct: 288 WTPYYVMC 295


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -3

Query: 578 PITKLFHSRNIPNILLQSSYKMCNYFETHVH 486
           P   +FH  + PNI         N F T+ H
Sbjct: 185 PQMVVFHVESHPNITWYQQCVTYNVFPTYAH 215



 Score = 21.4 bits (43), Expect = 6.1
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -2

Query: 90  WTPYFMFC 67
           WTPY++ C
Sbjct: 288 WTPYYVMC 295


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
 Frame = +3

Query: 456 IAFGIPFIITVYMGFKV----VTHFITAL 530
           IAF + FI+TV+M   V    + HF+  +
Sbjct: 82  IAFEVIFIVTVWMTGAVKHSKIAHFLNKM 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,857
Number of Sequences: 336
Number of extensions: 3526
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)