Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_P02
(603 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855488-1|ABH88175.1| 112|Tribolium castaneum chemosensory pro... 23 2.6
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 22 3.5
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 22 4.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 4.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 4.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 4.6
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 22 4.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 4.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 4.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 4.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 4.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 4.6
>DQ855488-1|ABH88175.1| 112|Tribolium castaneum chemosensory
protein 1 protein.
Length = 112
Score = 22.6 bits (46), Expect = 2.6
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 309 CRSGESPPEPLGR 347
C +GE+P +P+GR
Sbjct: 51 CATGEAPCDPVGR 63
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 22.2 bits (45), Expect = 3.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 477 SH*AEAHGNVREEPAPHKGRH*AREISLNHYFITVT 584
+H E + +V+EEP R + LNH+ +VT
Sbjct: 40 THNNEMYHSVKEEPIYESCRFSINQPYLNHFDNSVT 75
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 21.8 bits (44), Expect = 4.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 477 SH*AEAHGNVREEPAPHKGRH*AREISLNHYFITVT 584
+H E + V+EEP R + LNH+ +VT
Sbjct: 40 THNNEMYHRVKEEPIYESCRFSINQPYLNHFDNSVT 75
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 145 PXTSTPTEKIVLPSAEDVATXKTQKS 222
P TST ++ + P++ +T T+K+
Sbjct: 157 PATSTTSQNLSSPASSTSSTSSTEKA 182
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 145 PXTSTPTEKIVLPSAEDVATXKTQKS 222
P TST ++ + P++ +T T+K+
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKA 182
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 145 PXTSTPTEKIVLPSAEDVATXKTQKS 222
P TST ++ + P++ +T T+K+
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKA 182
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 21.8 bits (44), Expect = 4.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 477 SH*AEAHGNVREEPAPHKGRH*AREISLNHYFITVT 584
+H E + V+EEP R + LNH+ +VT
Sbjct: 40 THNNEMYHRVKEEPIYESCRFSINQPYLNHFDNSVT 75
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 145 PXTSTPTEKIVLPSAEDVATXKTQKS 222
P TST ++ + P++ +T T+K+
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKA 182
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 145 PXTSTPTEKIVLPSAEDVATXKTQKS 222
P TST ++ + P++ +T T+K+
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKA 182
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 145 PXTSTPTEKIVLPSAEDVATXKTQKS 222
P TST ++ + P++ +T T+K+
Sbjct: 113 PATSTASQNLSSPASSTSSTSSTEKA 138
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 145 PXTSTPTEKIVLPSAEDVATXKTQKS 222
P TST ++ + P++ +T T+K+
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKA 182
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 145 PXTSTPTEKIVLPSAEDVATXKTQKS 222
P TST ++ + P++ +T T+K+
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKA 182
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.312 0.128 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,620
Number of Sequences: 336
Number of extensions: 2189
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)
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