Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_P02
(603 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 92 4e-19
SB_16625| Best HMM Match : Death (HMM E-Value=1.5) 38 0.006
SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1) 32 0.31
SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6) 31 0.54
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01) 25 1.2
SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087) 30 1.7
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 30 1.7
SB_54391| Best HMM Match : MarR (HMM E-Value=0.95) 29 2.9
SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5) 29 2.9
SB_51707| Best HMM Match : TP2 (HMM E-Value=6.3) 29 2.9
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 29 2.9
SB_49258| Best HMM Match : Herpes_UL6 (HMM E-Value=0.18) 29 3.8
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 29 3.8
SB_31755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_2942| Best HMM Match : Peptidase_M10_N (HMM E-Value=0.69) 29 3.8
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 29 3.8
SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9) 29 3.8
SB_58926| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23) 28 5.1
SB_29507| Best HMM Match : E-MAP-115 (HMM E-Value=5.1) 28 5.1
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 28 5.1
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_52306| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_25209| Best HMM Match : Astacin (HMM E-Value=7.69999e-41) 28 6.7
SB_53576| Best HMM Match : SCAN (HMM E-Value=2.3) 28 6.7
SB_25735| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_46402| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 91.9 bits (218), Expect = 4e-19
Identities = 52/136 (38%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Frame = +1
Query: 157 TPTEKIVLPSAEDVATXKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQN 336
T EK ++PS ED+ ++ FD S+LKH ET EKNPLP V+ E +
Sbjct: 619 TTQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEV 676
Query: 337 LLD--GVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTKLKHTETCE 510
L D V FD +++KH +EKNPL + ++ FD +KLKH +T E
Sbjct: 677 LPDVSAVASFDASKLKHVEVQEKNPLPTKDDITTESTETRA--EVKTFDHSKLKHVQTEE 734
Query: 511 KNPLPTKDVIEQEKSA 558
KNPLP I QEK++
Sbjct: 735 KNPLPDAKTIAQEKAS 750
Score = 86.6 bits (205), Expect = 1e-17
Identities = 59/168 (35%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
Frame = +1
Query: 64 TLPSLKDLPKXRHRPEESARRLQ---HQLSPXTSTPT-EKIVLPSAEDVATXKTQKSLFD 231
TLPS + + K +P+E R + + S T EK LP+ + +A K + + F
Sbjct: 432 TLPSDETI-KQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKDTIADEK-RTAPFS 489
Query: 232 GIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKNP 405
G+E F ++LKH ET EKNPLPD + AE + L D V FD +++KH T+EK
Sbjct: 490 GVEVFQKNKLKHVETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVV 549
Query: 406 LXXXXXXXXXXXXNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 549
+ ++ +++FD +KLKH T EKNPLPT + +E
Sbjct: 550 MPTKDVIEAEAIDSR--AEVKSFDHSKLKHVVTQEKNPLPTPQTLHEE 595
Score = 86.6 bits (205), Expect = 1e-17
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Frame = +1
Query: 166 EKIVLPSAEDVATXKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD 345
EK+V+P+ +DV + S + ++ FD S+LKH TQEKNPLP + E +N D
Sbjct: 546 EKVVMPT-KDVIEAEAIDSRAE-VKSFDHSKLKHVVTQEKNPLPTPQTLHEELIPKNKPD 603
Query: 346 --GVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTKLKHTETCEKNP 519
V FD T++KH TT+EK+ + ++ +++FD +KLKH ET EKNP
Sbjct: 604 RSEVASFDHTKLKHVTTQEKSIMPSQEDIKEEAVDSR--AEVKSFDHSKLKHVETVEKNP 661
Query: 520 LPTKDVIEQE 549
LP+ V+++E
Sbjct: 662 LPSAAVLKEE 671
Score = 79.4 bits (187), Expect = 2e-15
Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Frame = +1
Query: 163 TEKIVLPSAEDVATXKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLL 342
T + + P +E K + KFD++ LKH +T+EKN LP + + E
Sbjct: 390 TPQQIWPGSEVAYVDGGSKPDVSEVAKFDAANLKHVQTKEKNTLPSDETIKQELQPDEFP 449
Query: 343 D--GVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTKLKHTETCEKN 516
D V+ F+K++++H T+EKN L F +G+E F KLKH ET EKN
Sbjct: 450 DRAEVKSFEKSKLQHVETKEKNTLPTKDTIADEKRTAPF-SGVEVFQKNKLKHVETLEKN 508
Query: 517 PLPTKDVIEQE 549
PLP I E
Sbjct: 509 PLPDAQNIRAE 519
Score = 76.2 bits (179), Expect = 2e-14
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Frame = +1
Query: 166 EKIVLPSAEDVATXKTQKSLFDGIE--KFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNL 339
EK LP+ + + K+ D E FD ++LKH TQEK+ +P ++ + E
Sbjct: 582 EKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKSIMPSQEDIKEEAVDSRA 641
Query: 340 LDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKF--LNGIENFDPTKLKHTETCEK 513
V+ FD +++KH T EKNPL ++ + +FD +KLKH E EK
Sbjct: 642 --EVKSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEK 699
Query: 514 NPLPTKDVIEQEKS 555
NPLPTKD I E +
Sbjct: 700 NPLPTKDDITTEST 713
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +1
Query: 295 PDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIE-- 468
P +V + + + V FD +KH T+EKN L ++F + E
Sbjct: 396 PGSEVAYVDGGSKPDVSEVAKFDAANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVK 455
Query: 469 NFDPTKLKHTETCEKNPLPTKDVIEQEK 552
+F+ +KL+H ET EKN LPTKD I EK
Sbjct: 456 SFEKSKLQHVETKEKNTLPTKDTIADEK 483
>SB_16625| Best HMM Match : Death (HMM E-Value=1.5)
Length = 528
Score = 37.9 bits (84), Expect = 0.006
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 24/150 (16%)
Frame = +1
Query: 181 PSAEDV--ATXKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAE 321
PS+E A T L DG++ F ++ +H + T E++P DK A
Sbjct: 169 PSSEKSYQALRDTTHDLLDGLQHFGQAKEEHAKLIPKYHEIMIKTIEQDPTSDKSYKALR 228
Query: 322 KAHQNLLDGVEHFDKTQMKHTT-----------TEEKNPLXXXXXXXXXXXXNKFLNGIE 468
+LLDG+ + D+ + +H T E++P + L+G+
Sbjct: 229 DTTHDLLDGLRYSDQAKEEHAKLIPKYHEIMIKTIEQDPTSDKSYKALRDTTHDLLDGLR 288
Query: 469 NFDPTKLKHTETCEKNPLPTKDVIEQEKSA 558
+FD K +H + K IEQ+ ++
Sbjct: 289 DFDQAKEEHAKLIPKYHKIMIKTIEQDPTS 318
Score = 33.1 bits (72), Expect = 0.18
Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 24/150 (16%)
Frame = +1
Query: 181 PSAEDV--ATXKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAE 321
PS+E A T L DG+ D ++ +H + T E++P +K A
Sbjct: 120 PSSEKSYQALRDTTHDLLDGLRYSDQAKEEHAKLIPKYHEIMIKTIEQDPSSEKSYQALR 179
Query: 322 KAHQNLLDGVEHFDKTQMKHT-----------TTEEKNPLXXXXXXXXXXXXNKFLNGIE 468
+LLDG++HF + + +H T E++P + L+G+
Sbjct: 180 DTTHDLLDGLQHFGQAKEEHAKLIPKYHEIMIKTIEQDPTSDKSYKALRDTTHDLLDGLR 239
Query: 469 NFDPTKLKHTETCEKNPLPTKDVIEQEKSA 558
D K +H + K IEQ+ ++
Sbjct: 240 YSDQAKEEHAKLIPKYHEIMIKTIEQDPTS 269
>SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1)
Length = 766
Score = 32.3 bits (70), Expect = 0.31
Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Frame = +1
Query: 280 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHT-----------TTEEKNPLXXXXXX 426
E++P +K A +LLDG+ +FD+ + +H E++P
Sbjct: 173 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKSEKSYQ 232
Query: 427 XXXXXXNKFLNGIENFDPTKLKHTETCEK-NPLPTKDVIEQEKS 555
+ L+G+ FD K +H + K + + K++ + KS
Sbjct: 233 ALRDTTHDLLDGLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKS 276
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 280 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 381
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 75 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 108
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 280 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 381
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 320 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 353
>SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6)
Length = 692
Score = 31.5 bits (68), Expect = 0.54
Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Frame = +1
Query: 271 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHT-----------TTEEKNPLXXX 417
+T E++P +K A +LLDG+ +FD+ + +H T +++P
Sbjct: 537 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQAKEEHAKLIPKYHEIMIKTIKQDPSSEK 596
Query: 418 XXXXXXXXXNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKSA 558
+ L+G+ +F K +H + K IEQ+ ++
Sbjct: 597 SYQALRDTTHDLLDGLRDFGQAKEEHAKLIPKYHEIMIKTIEQDPTS 643
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 30.7 bits (66), Expect = 0.95
Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 11/128 (8%)
Frame = +1
Query: 208 KTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHT- 384
K ++ L I K+ +K T E++P +K A +LLDG+ +FD+ +H
Sbjct: 549 KGKEELAKLIPKYHEIMIK---TIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEHAK 605
Query: 385 ----------TTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTKLKHTETCEKNPLPTKD 534
E++P +G+ +FD K +H + K
Sbjct: 606 LIPKYHEILIKKIEQDPSSEKRYQALRDTTYNLFDGLRDFDHAKEEHAKLIPKYHEIMIK 665
Query: 535 VIEQEKSA 558
IEQ+ ++
Sbjct: 666 TIEQDPTS 673
>SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01)
Length = 590
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 366 DSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHREL 473
DSD+ +DD +STA R R + + P R L
Sbjct: 281 DSDDDYDDREGDSTAKIRKGRRSDTDDLSPNPRRLL 316
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 249 FEPAEAHRDSGEE 287
FEP E H DSG+E
Sbjct: 266 FEPMEIHDDSGDE 278
>SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087)
Length = 556
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 208 KTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 381
K ++ L I K+ +K T E++P +K A +LLDG+ +FD+ +H
Sbjct: 474 KGKEELAKLIPKYHEIMIK---TIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 528
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 399 ESTAPDRSYRSGEGKEQIPERHR 467
+STA D SY SG G E P HR
Sbjct: 483 DSTASDSSYDSGSGPELSPNEHR 505
>SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 1170
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +1
Query: 22 QKYIDSQLACSAELTL-PSLKDLPKXRHRPEESARRLQHQLSPXTSTPTEKIVLPSAEDV 198
Q+Y ++ A SAE+T PS LPK +A + +L P + LPS
Sbjct: 1072 QRYEETVAAISAEVTYEPSTTHLPKEVREQLVTAAAVMTELQPHLLGEAQATTLPSVTQE 1131
Query: 199 ATXKTQKSLFDGIEKFDSSQLKHTETQEKNP 291
+ Q+ + S + ++T ++ P
Sbjct: 1132 EVAQRQRDDLVISRLYTSEPVDGSQTSKRCP 1162
>SB_54391| Best HMM Match : MarR (HMM E-Value=0.95)
Length = 837
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 11/104 (10%)
Frame = +1
Query: 280 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHT-----------TTEEKNPLXXXXXX 426
E++P +K A +LLDG+ +FD+ +H E++P
Sbjct: 308 EQDPSSEKSYQALRDTTHDLLDGLRYFDQAWKEHAKLIPKYHEIMIKNIEQDPSSEKSCK 367
Query: 427 XXXXXXNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKSA 558
+ L+G+ +F +K +H + K IEQ+ ++
Sbjct: 368 ALRHTTHDLLDGLRDFGQSKEEHAKLIPKYHEIMIKTIEQDPTS 411
>SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5)
Length = 674
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +1
Query: 169 KIVLPSAEDVATXK-----TQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQ 333
++VLP+ +DV K + GI + DSS + + + +PD ++AE
Sbjct: 347 QVVLPNVKDVTFTPFCWKFAYKFEYTGITESDSS-MSLARVRRTSSVPDSLQLSAELLSV 405
Query: 334 NLLDGVEHFDKTQMKHTTTE 393
++ V+H +K + TT +
Sbjct: 406 GSVESVDHREKYPLNKTTAD 425
>SB_51707| Best HMM Match : TP2 (HMM E-Value=6.3)
Length = 396
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/98 (22%), Positives = 36/98 (36%)
Frame = +1
Query: 88 PKXRHRPEESARRLQHQLSPXTSTPTEKIVLPSAEDVATXKTQKSLFDGIEKFDSSQLKH 267
PK R PE + + L P S + + VA S G++
Sbjct: 257 PKPRGHPETQVPQQPNILPPLNSYRAQSHASSTPLPVAVVLPTSSSSQGVQDSAGCSQNS 316
Query: 268 TETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 381
+TQEK K +A H+ ++D V + ++H
Sbjct: 317 ADTQEKRDESRKKGIARLHFHKQVVDEVRSALRPFLRH 354
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/71 (16%), Positives = 34/71 (47%)
Frame = +3
Query: 270 RDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 449
++ G+ + ++ R E P + L + ++ D+ + +E PD+ + +++
Sbjct: 829 QEQGKPDKNKEKQDREQEKPDKDLEKQYQKQEKPDKGQEKQDREQEKPDKDQEKQDREQE 888
Query: 450 IPERHRELRSH 482
P++ +E + H
Sbjct: 889 KPDKDQEKQDH 899
>SB_49258| Best HMM Match : Herpes_UL6 (HMM E-Value=0.18)
Length = 899
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 11/104 (10%)
Frame = +1
Query: 280 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHT-----------TTEEKNPLXXXXXX 426
E++P +K A +LLDG+ +FD+ +H E++P
Sbjct: 186 EQDPSSEKSYQALRDTTHDLLDGMRYFDQAWKEHAKLIPKYHEIMIKNIEQDPSSEKSYQ 245
Query: 427 XXXXXXNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKSA 558
+ L+G+ +F K +H + K IEQ+ ++
Sbjct: 246 ALRHTTHYLLDGLRDFGQAKEEHAKLIPKYHEIMIKTIEQDPTS 289
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/72 (27%), Positives = 27/72 (37%)
Frame = +3
Query: 255 PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 434
P+ RDS E S + + SPP S S + DD R R R
Sbjct: 51 PSSLGRDSSERRPSARVSSDNSRSPPHRRDSSRRSHSPSRRSSDD-RSTDARDRRDRRRS 109
Query: 435 EGKEQIPERHRE 470
+E+ P R R+
Sbjct: 110 SSRERRPPRDRD 121
>SB_31755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 11/104 (10%)
Frame = +1
Query: 280 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHT-----------TTEEKNPLXXXXXX 426
E++P +K A +LLDG+ +FD+ +H E++P
Sbjct: 189 EQDPSSEKSYQALRDTTHDLLDGMRYFDQAWKEHAKLIPKYHEIMIKNIEQDPSSEKSCK 248
Query: 427 XXXXXXNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKSA 558
+ L+G+ +F K +H + K IEQ+ ++
Sbjct: 249 ALRHTTHDLLDGLRDFGQAKEEHAKLIPKYHEIMIKTIEQDPTS 292
>SB_2942| Best HMM Match : Peptidase_M10_N (HMM E-Value=0.69)
Length = 123
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -3
Query: 346 RPRGSGGLSPLRQHLCPEAGSSPESRCASAGSNQTSRYRR-IKTSGSXQWRRLQQT 182
RP GG E S S+CA + S SR RR + + QW R ++T
Sbjct: 66 RPTLDGGRRTSHTTSSSETISPSRSKCACSNSRSASRPRRHLDFTSQEQWTRKRRT 121
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 187 AEDVATXKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLL 342
++D KT+ S+ + + DSS T+EK +KD E+ ++L+
Sbjct: 1546 SDDGTDEKTEDSMQEDAKDLDSSNTASDTTKEKGKNKEKDKTVLERWEESLM 1597
>SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9)
Length = 646
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -1
Query: 453 EFVLFLLRFDSFDRGQWILFFRRRVLHLSLVEVFNSVQEVL 331
+FVL++LRF +D I ++ + HL+LVE + +Q+ L
Sbjct: 295 DFVLYMLRFSDYD----IYTGKKSIAHLTLVEFESWLQDEL 331
>SB_58926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2371
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 200 ATSSADGSTIFSVGVDVXGDSWC*SLRADSSGLWRXLGRSFRXGSVSS 57
++S DGS S G G SWC + + S L LGR R +++
Sbjct: 192 SSSEIDGSHSASAGRLYGGSSWCSATSSSSEYLQVDLGRVVRVTGIAT 239
>SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23)
Length = 385
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 229 DGIEKFDSSQLKHTETQEKNPLP 297
D +E+F S +H T +KNPLP
Sbjct: 206 DRLEQFSSQTGRHINTTKKNPLP 228
>SB_29507| Best HMM Match : E-MAP-115 (HMM E-Value=5.1)
Length = 198
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = +3
Query: 270 RDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG--EGK 443
RD+ + + C R R T +DS D ++ST + ++ +G+
Sbjct: 27 RDTRDRDEDARDCDRGTPDRDSKCDRD-TRDRDSKRDRDTHDRDSTRDEDTHEIDIPDGR 85
Query: 444 EQIPERHRELRSH*AEAHGNVREEPAPHKGRH 539
E+ E +R S A + + RE A ++GR+
Sbjct: 86 ERDHEDNRSRASSRASSRASSRERDARNRGRY 117
>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
Length = 446
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 217 KSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTE 393
KS+F + + + TET+E NP D AE+ ++ +G T+ K T E
Sbjct: 276 KSVFKRNRPTEPASVPSTETKEANPNVTADTKQAEQNEGSMSEGTTSKTITENKTTNME 334
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -2
Query: 248 SNFSIPSNKDFWVXSVATSSADGSTIFSVGVDVXGDSWC*SLRADSSGLWRXLG 87
+N S + V + +SS DG+ S G G SWC S A++ L LG
Sbjct: 498 NNISWTPYNESGVQRMTSSSNDGAYTASAGRLYGGSSWCSSTSANNEYLQVDLG 551
>SB_52306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +3
Query: 255 PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 434
P + HR S + +G+R G+ PE R ++ + E + T G
Sbjct: 75 PEKQHRGSVHKRGNGER----GQGSPEKQQRGSVHKRGNGEGKSSPENQHTGSIYKRGKG 130
Query: 435 EGKEQIPERHR 467
EGK +HR
Sbjct: 131 EGKSSPENQHR 141
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 316 LRQHLCPEAGSSPESRCASAGSNQTSRYRR 227
L HL S P SRCA + S+ + RYRR
Sbjct: 446 LHCHLLVCNASDPNSRCAQSCSSFSRRYRR 475
>SB_25209| Best HMM Match : Astacin (HMM E-Value=7.69999e-41)
Length = 533
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = -3
Query: 253 SNQTSRYRRIKTSGSXQ-WR 197
+N+TS+YRRI+ GS Q WR
Sbjct: 62 TNRTSKYRRIRRRGSRQTWR 81
>SB_53576| Best HMM Match : SCAN (HMM E-Value=2.3)
Length = 334
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Frame = +3
Query: 279 GEEPASGQRC----CRSGESPPEPLGRS*T-LRQDSDEAHDDGRK---ESTAPDRSYRSG 434
GEEP+S S + P P+ + + +D D+ +G + ES A DRS+ SG
Sbjct: 181 GEEPSSRTETPDLYILSNDIPTSPVDEAPLPVDEDDDDEQVNGLRMLPESVALDRSHESG 240
Query: 435 EGKEQIP 455
G +P
Sbjct: 241 RGTPHLP 247
>SB_25735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 257 WLESNFSIPSNKDFWVXSVATSSA-DGSTIFSVGVDVXGDSWC*SLRADSSGLWRXLG 87
W S+ + + + S TSS+ DG+ S G G SWC S A++ L LG
Sbjct: 201 WCTCASSLGVERGYILDSQMTSSSNDGAYTASAGRLYGGSSWCSSTSANTEYLQVDLG 258
>SB_46402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 27.5 bits (58), Expect = 8.8
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Frame = +3
Query: 192 RRRH*XDPEVFIRRYREV*FEPAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDS 371
R +H DP + R R F PA+ H + G PA R + + + S
Sbjct: 383 RVQHVTDPRID-REVRSKAFAPAKVHAE-GAAPAPSSRMHAAHSMTAAGTASAPGPGEKS 440
Query: 372 DE-AHDDGRKESTAPDRSYRSGEGKEQIPERHRELR 476
D A G + S + SG G E++ ERH R
Sbjct: 441 DHTALMAGCRHSRLKTVTDPSGHGGERLAERHHNSR 476
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.128 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,640,367
Number of Sequences: 59808
Number of extensions: 327319
Number of successful extensions: 922
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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