Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P02
         (603 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.43 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.3  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   7.0  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   7.0  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   9.3  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 324  SPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKE 446
            SPP PL  S    +D D   D  + + ++ +R   +G  +E
Sbjct: 1396 SPPTPLSISRAGSRDEDSTRDSTKLDRSSREREVHNGGQQE 1436


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +3

Query: 375 EAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRSH*AEAH 497
           E HDD  + S  P   + + E    I    R+ RS    AH
Sbjct: 59  EGHDDREQPSVYPLLRFENPETHHPIRHGRRQSRSMDLNAH 99


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 309 CRSGESPPEPLGR 347
           C  GE+P +P+GR
Sbjct: 54  CALGEAPCDPVGR 66


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 309 CRSGESPPEPLGR 347
           C  GE+P +P+GR
Sbjct: 54  CALGEAPCDPVGR 66


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +1

Query: 64  TLPSLKDLPKXRHRPEESARRLQHQLSPXTSTPTE 168
           + PSL  +     + + + + L+ Q+SP  ++P E
Sbjct: 391 SFPSLYPMATTSPQSQSTIQTLRPQVSPDRTSPME 425


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.312    0.128    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,594
Number of Sequences: 438
Number of extensions: 2592
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)