Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_P01
(650 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 56 6e-08
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 54 1e-07
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 52 5e-07
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 47 2e-05
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 45 1e-04
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 44 1e-04
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 44 1e-04
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 42 5e-04
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 40 0.004
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 39 0.005
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 38 0.009
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 38 0.012
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 37 0.021
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 36 0.048
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 36 0.048
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 36 0.048
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 36 0.048
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 36 0.048
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 31 1.4
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 31 1.4
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 31 1.4
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 29 5.5
AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone rece... 29 7.2
AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2 ... 29 7.2
AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC... 29 7.2
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 55.6 bits (128), Expect = 6e-08
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Frame = -2
Query: 568 PIXYXLXVREDRTDGYAGVALLVHNTIPFDHIPIANHSIDFSIIAVSIN---KICFVSVY 398
PI Y L + T+ + GV LLVH +I H + N +ID IA++I K+ S Y
Sbjct: 48 PINYKL-LTNIATNRFGGVRLLVHKSI--QHT-VLNITIDIEAIAINIESKLKLNIFSTY 103
Query: 397 IPHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCIL 218
I + + + P LI GDFN H WGS ++ G +D+ + +L
Sbjct: 104 ISPTKNITNQTLHNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILL 163
Query: 217 N----TGVATRRTQPHEGIS--APDLSLTTRWLSFLTDLENT 110
N T +T T H ++ +P L+ +W L DL +
Sbjct: 164 NDKSPTHFSTHNTYTHIDLTLCSPILAPHAKW-KILNDLHGS 204
Score = 33.1 bits (72), Expect = 0.34
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 138 LASLLTWKTLSSTYDSDHYPILITLPKKLVRTKFRRP 28
LA WK L+ + SDH+PI+ TL KF RP
Sbjct: 189 LAPHAKWKILNDLHGSDHFPIITTLFPTTNPQKFYRP 225
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Frame = -2
Query: 517 GVALLVHNTIP-FDHIPIANHSIDFS--IIAVSINKICFVSVYIPHXTSSIFDEIEVIIS 347
G A+L+ N++ F PIA + + +I ++ I F +VY P + DE + I+
Sbjct: 67 GAAILIKNSLAHFPLTPIATAKVQLAPAVIETALGPISFGAVYCPPRFAWTTDEFKDILE 126
Query: 346 QLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATR 197
+ ++ GD+NA H WG+ S+ G + +++ ++ L TG TR
Sbjct: 127 EFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTR 176
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 52.4 bits (120), Expect = 5e-07
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Frame = -2
Query: 532 TDGYAGVALLVHNTIPFDHIPIANHSIDFSIIAVSINKIC-FVSVYIPHXTSSIFDEIEV 356
T G+ +L+ +P + I N SI S + ++ ++ V+ YIP +I
Sbjct: 63 TSAKQGIGVLIKRNVPHTYRNI-NSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISE 121
Query: 355 IISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATRRTQPHEG 176
I+ L ++LGD N+ WGS ++ G +I ++ N+ +LN G T H
Sbjct: 122 ILQNLNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPT-HLSTHNT 180
Query: 175 ISAPDLSL 152
+ D+SL
Sbjct: 181 FTHIDISL 188
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 47.2 bits (107), Expect = 2e-05
Identities = 52/176 (29%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Frame = -2
Query: 607 ETWLKTRL*XQNFPIXYXLXVREDRTDGYAG-VALLVHNTIPFDHIP-IANHSID---FS 443
ETWL F I R DR + G VA+ V NT+ + IP I +H I+
Sbjct: 45 ETWLTHS---DRFNIPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQ 101
Query: 442 IIAVSINKICFVSVYIPHXTS-----------------SIFDEIEVIISQLPKPVLILGD 314
I S + + S+Y TS S++ + ISQ+ LI GD
Sbjct: 102 INTDSNSSLKIYSIYFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGD 161
Query: 313 FNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATRRTQPHEG-ISAPDLSLT 149
FN++H+AW T ++ +G + ++ D F IL T H+ S DL LT
Sbjct: 162 FNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPHNHKAKASTLDLCLT 217
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 44.8 bits (101), Expect = 1e-04
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 23/164 (14%)
Frame = -2
Query: 571 FPIXYXLXVREDRTDGYAG-VALLVHNTIPFDHIP-IANHSID---FSIIAVSINKICFV 407
F I R DR + G VA+ V NT+ + IP I +H I+ I S + +
Sbjct: 2 FNIPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIY 61
Query: 406 SVYIPHXTS-----------------SIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTN 278
S+Y TS S++ + ISQ+ LI GDFN++H+AW T
Sbjct: 62 SIYFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTR 121
Query: 277 SSYYGARILDILDSNNFCILNTGVATRRTQPHEG-ISAPDLSLT 149
++ +G + ++ D F IL T H+ S DL LT
Sbjct: 122 ANGWGKILNELSDLGKFSILYPTQPTYIPHNHKAKASTLDLCLT 165
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = -2
Query: 439 IAVSINKICFVSVYIPHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGA 260
+ S+ + +VY+P I D+ + + + L + GD+NA+H WG+ S G
Sbjct: 97 LQTSVGTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGK 156
Query: 259 RILDILDSNNFCILNTGVAT 200
+ +++ + +L TG T
Sbjct: 157 MLQEVIAHGQYQVLATGEPT 176
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = -2
Query: 439 IAVSINKICFVSVYIPHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGA 260
+ S+ + +VY+P I D+ + + + L + GD+NA+H WG+ S G
Sbjct: 97 LQTSVGTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGK 156
Query: 259 RILDILDSNNFCILNTGVAT 200
+ +++ + +L TG T
Sbjct: 157 MLQEVIAHGQYQVLATGEPT 176
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 42.3 bits (95), Expect = 5e-04
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = -2
Query: 517 GVALLVHNTIP-FDHIPIANHSIDFSIIAVS--INKICFVSVYIPHXTSSIFDEIEVIIS 347
GVA+ V T+ F I I S + V+ + + F ++Y T II
Sbjct: 68 GVAVFVRTTLRHFPQRVIETRHIQLSSVKVATGLGDLQFSAIYCSPSTRIEERHFTDIIR 127
Query: 346 QLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATR 197
+ L+ GD+NA+H WG T +S G + + L IL TG TR
Sbjct: 128 ACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTR 177
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 39.5 bits (88), Expect = 0.004
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = -2
Query: 574 NFPIXYXLXVREDRTDGYA--GVALLVHNTIPFDHIP-IANHSIDFSIIAVSINK--ICF 410
NF I L + DG A G +L+ N I H+ + + + IA+ +N
Sbjct: 45 NFHIPGYLFYGTNHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTL 104
Query: 409 VSVYIPHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDIL 242
+VY P D+ + L + GD+NA+H WGS S G ++ + L
Sbjct: 105 AAVYCPPRFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNAL 160
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 39.1 bits (87), Expect = 0.005
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = -2
Query: 394 PHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 218
PH + + + E + K +++ GD+NA+H+ WG + GA + D + +++ I+
Sbjct: 140 PHHFTDVLNFAEKTMGGQTK-LILCGDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIV 198
Query: 217 NTGVATRRTQPHEGISAP 164
TG AT PH+ +P
Sbjct: 199 ATGSATH--FPHDTRKSP 214
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 38.3 bits (85), Expect = 0.009
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = -2
Query: 574 NFPIXYXLXVREDRTDGYA--GVALLVHNTIPFDHIP-IANHSIDFSIIAVSINK--ICF 410
NF I L + DG A G +L+ N I H+ + + + IA+ +N
Sbjct: 45 NFHIPGYLFYGTNHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTL 104
Query: 409 VSVYIPHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDIL 242
+VY P D+ + L + GD+NA+H WGS + G ++ + L
Sbjct: 105 AAVYCPPRFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNAL 160
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 37.9 bits (84), Expect = 0.012
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = -2
Query: 400 YIPHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC- 224
++PH + + + E + K +L GD+NA+H+ WG T + G + + + +++
Sbjct: 126 WLPHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADSTAE 184
Query: 223 ILNTGVATRRTQPHE 179
I+ TG AT PH+
Sbjct: 185 IIATGCATH--FPHD 197
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 37.1 bits (82), Expect = 0.021
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = -2
Query: 442 IIAVSINKICFVSVYIPHXTS--SIFDEIEVIISQLP--KPVLILGDFNAQHQAWGSTNS 275
I I I F S Y P S D +E +++ +P +I GD NA WGS S
Sbjct: 79 IAYAKIRGIHFYSCYAPPSDSPEQFEDMLEKLVNHASGRRPTVIGGDLNAWATEWGSRIS 138
Query: 274 SYYGARILDILDSNNFCILNTG 209
+ G ++D ++ + +LN G
Sbjct: 139 NTRGRAVIDAMNLLDLVLLNDG 160
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 35.9 bits (79), Expect = 0.048
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 394 PHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 218
PH + + + E + K +L GD+NA+H+ WG T + G + + + ++ I+
Sbjct: 12 PHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 70
Query: 217 NTGVATRRTQPHE 179
TG AT PH+
Sbjct: 71 ATGCATH--FPHD 81
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.9 bits (79), Expect = 0.048
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 394 PHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 218
PH + + + E + K +L GD+NA+H+ WG T + G + + + ++ I+
Sbjct: 128 PHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 186
Query: 217 NTGVATRRTQPHE 179
TG AT PH+
Sbjct: 187 ATGCATH--FPHD 197
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.9 bits (79), Expect = 0.048
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 394 PHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 218
PH + + + E + K +L GD+NA+H+ WG T + G + + + ++ I+
Sbjct: 128 PHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 186
Query: 217 NTGVATRRTQPHE 179
TG AT PH+
Sbjct: 187 ATGCATH--FPHD 197
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 35.9 bits (79), Expect = 0.048
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 394 PHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 218
PH + + + E + K +L GD+NA+H+ WG T + G + + + ++ I+
Sbjct: 90 PHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 148
Query: 217 NTGVATRRTQPHE 179
TG AT PH+
Sbjct: 149 ATGCATH--FPHD 159
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.9 bits (79), Expect = 0.048
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 394 PHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 218
PH + + + E + K +L GD+NA+H+ WG T + G + + + ++ I+
Sbjct: 128 PHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 186
Query: 217 NTGVATRRTQPHE 179
TG AT PH+
Sbjct: 187 ATGCATH--FPHD 197
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -2
Query: 382 SSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARI-LDILDSNNFCILNTGV 206
S +F+ E+++ K +L GD+N +H+ WG+ S G + IL + I+ TG
Sbjct: 136 SKLFNHFEMLLDGKSKFILG-GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGH 194
Query: 205 AT 200
AT
Sbjct: 195 AT 196
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -2
Query: 382 SSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARI-LDILDSNNFCILNTGV 206
S +F+ E+++ K +L GD+N +H+ WG+ S G + IL + I+ TG
Sbjct: 136 SKLFNHFEMLLDGKSKFILG-GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGH 194
Query: 205 AT 200
AT
Sbjct: 195 AT 196
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -2
Query: 382 SSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARI-LDILDSNNFCILNTGV 206
S +F+ E+++ K +L GD+N +H+ WG+ S G + IL + I+ TG
Sbjct: 136 SKLFNHFEMLLDGKSKFILG-GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGH 194
Query: 205 AT 200
AT
Sbjct: 195 AT 196
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 29.1 bits (62), Expect = 5.5
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Frame = -2
Query: 574 NFPIXYXLXVREDRTDGYA--GVALLVHNTIPFD-HIPIANHSIDFSIIAVSINK---IC 413
NF I + DG A G A+L+ N + + A + + + I + ++ +
Sbjct: 45 NFQIRDYHFYGTNHPDGKAHGGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLT 104
Query: 412 FVSVYIPHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGS 284
+VY P + + + L + GD+NA+H WGS
Sbjct: 105 LAAVYCPPRFTVLEAQFLDFFQALGPHFIAAGDYNAKHTHWGS 147
>AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone
receptor 4 protein.
Length = 1518
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 349 SQLPKPVLILGDFNAQHQAWGSTNSSYYG 263
SQLP L + +AQ Q WGS+NS+ G
Sbjct: 866 SQLPPGQLQALNLSAQQQQWGSSNSTGLG 894
>AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2
protein.
Length = 1464
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 349 SQLPKPVLILGDFNAQHQAWGSTNSSYYG 263
SQLP L + +AQ Q WGS+NS+ G
Sbjct: 811 SQLPPGQLQALNLSAQQQQWGSSNSTGLG 839
>AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC
protein.
Length = 1518
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 349 SQLPKPVLILGDFNAQHQAWGSTNSSYYG 263
SQLP L + +AQ Q WGS+NS+ G
Sbjct: 866 SQLPPGQLQALNLSAQQQQWGSSNSTGLG 894
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,978,510
Number of Sequences: 53049
Number of extensions: 567137
Number of successful extensions: 1152
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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