Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P01
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   4.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   4.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.8  

>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -3

Query: 498 IIQYLLTTFLLQTIALI 448
           I +YLL TF++ T++++
Sbjct: 296 IAKYLLFTFIMNTVSIL 312


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 254 YSCTIVTGIGATPSLVLCIKI 316
           Y C  V GIGA  S V+ I +
Sbjct: 753 YLCEAVNGIGAGLSAVIFISV 773


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 416 YFINTYCYYREINAMVCNRNVVKRYCIMNK 505
           +F NT+CY+R  NA    +N V+    ++K
Sbjct: 533 WFQNTFCYFRR-NAATW-KNAVRHNLSLHK 560


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 443 REINAMVCNRNVVKRYCIMNK*SYTSIAICSI 538
           RE N +VCN  V   Y I        I +C++
Sbjct: 801 REDNLLVCNSYVDASYMIAFAYPIMLIVVCTV 832


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 475 CGQKVLYYEQVKLHQHSH 528
           CG+   Y   +KLHQ +H
Sbjct: 237 CGKSFGYNHVLKLHQVAH 254


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 253 IFLHHSNWNWCYPKLGAV 306
           I LHH +W+  YP  G +
Sbjct: 205 INLHHWHWHLVYPFEGDI 222


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,922
Number of Sequences: 438
Number of extensions: 3817
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)