Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P01
         (650 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g61030.1 68416.m06828 C2 domain-containing protein similar to...    30   1.5  
At3g60950.1 68416.m06819 C2 domain-containing protein similar to...    30   1.5  
At5g39420.1 68418.m04775 protein kinase family protein contains ...    29   2.0  
At4g20800.1 68417.m03019 FAD-binding domain-containing protein s...    28   6.2  
At4g13750.1 68417.m02134 expressed protein                             27   8.2  

>At3g61030.1 68416.m06828 C2 domain-containing protein similar to
           CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam
           profile PF00168: C2 domain
          Length = 592

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/57 (21%), Positives = 29/57 (50%)
 Frame = -2

Query: 466 ANHSIDFSIIAVSINKICFVSVYIPHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQ 296
           ++H ++  ++    +    +S Y+P+      D ++ +  +  KPV++ GD N  H+
Sbjct: 505 SDHDMEGRMVTAEFDSFYLISTYVPNSV----DGLKGLDLEKSKPVVLTGDLNCAHE 557


>At3g60950.1 68416.m06819 C2 domain-containing protein similar to
           CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam
           profile PF00168: C2 domain
          Length = 592

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/57 (21%), Positives = 29/57 (50%)
 Frame = -2

Query: 466 ANHSIDFSIIAVSINKICFVSVYIPHXTSSIFDEIEVIISQLPKPVLILGDFNAQHQ 296
           ++H ++  ++    +    +S Y+P+      D ++ +  +  KPV++ GD N  H+
Sbjct: 505 SDHDMEGRMVTAEFDSFYLISTYVPNSV----DGLKGLDLEKSKPVVLTGDLNCAHE 557


>At5g39420.1 68418.m04775 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 644

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +3

Query: 60  WAKLLIWGSDHCRM*RKVFSKSVRKLSQRVVNDRSGALIPSWG*VRRVATP 212
           + K L+WG +HC M R V  + + K S  +VN++    +  +G +  V TP
Sbjct: 209 YMKQLLWGLEHCHM-RGVIHRDI-KASNILVNNKGVLKLGDFG-LANVVTP 256


>At4g20800.1 68417.m03019 FAD-binding domain-containing protein
           similar to SP|P93479 Reticuline oxidase precursor (EC
           1.5.3.9) (Berberine-bridge-forming enzyme) {Papaver
           somniferum}; contains Pfam profile PF01565: FAD binding
           domain
          Length = 528

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 613 YQETWLKTRL*XQNFPIXYXLXVREDRTDGYAG 515
           Y+ +W+ T    QN+P+     V  DR  G AG
Sbjct: 334 YEMSWINTTTFWQNYPVGTSTSVLLDRPSGPAG 366


>At4g13750.1 68417.m02134 expressed protein
          Length = 2137

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
 Frame = -2

Query: 508  LLVHNTIPFDHIPIANHSIDFSIIAVSINKICFVSVYIPHXTSSIFDEIEVIISQLPKPV 329
            L  H  +    +P        ++  + ++ +CFV  ++         E + IIS+L    
Sbjct: 1165 LSAHEIVKAHILPAFEARSTGAVDGLMVDYLCFVMTHLRSGCHICLKERKYIISELRSKA 1224

Query: 328  LILGDFNAQHQAWGSTN-SSYYGARI 254
            L+L ++  +    GS +    YG ++
Sbjct: 1225 LVLSNYGLKQLGEGSIHFGEEYGNQV 1250


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,790,758
Number of Sequences: 28952
Number of extensions: 276484
Number of successful extensions: 496
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)