Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_O21
         (483 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021571-5|CAA16513.2|  140|Caenorhabditis elegans Hypothetical ...    87   8e-18
AL021571-6|CAN99719.1|  142|Caenorhabditis elegans Hypothetical ...    86   1e-17
Z11126-7|CAO82061.1|  522|Caenorhabditis elegans Hypothetical pr...    28   3.1  
Z11126-6|CAA77471.2|  480|Caenorhabditis elegans Hypothetical pr...    28   3.1  
Z68493-8|CAA92795.1|  336|Caenorhabditis elegans Hypothetical pr...    27   5.4  
AB069909-1|BAB62876.1|  747|Caenorhabditis elegans junctophilin ...    27   5.4  
U64853-4|AAB04977.1|  286|Caenorhabditis elegans Egg laying defe...    27   7.1  
AF283983-1|AAG13398.1|  286|Caenorhabditis elegans C2H2 zinc fin...    27   7.1  
Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>AL021571-5|CAA16513.2|  140|Caenorhabditis elegans Hypothetical
           protein T19A6.3a protein.
          Length = 140

 Score = 86.6 bits (205), Expect = 8e-18
 Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
 Frame = +3

Query: 54  DDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDP---LTPVVSLTQSL 224
           +DLK FE+RLTEVI  + P   RWRI + I +V   +    +  +    +  +  +   L
Sbjct: 17  EDLKFFEKRLTEVITYMGPTCTRWRIAIVIFAVLVGVIGSKYFANEKIEIFQIPMIDMFL 76

Query: 225 WNHPFFAVTSTLLVLLFMI-GVHTKVVAPSIITARTRSILNDFNMSCDDTGKLILKPRPA 401
             H  F +   + +LLF + GVH ++VAP+I+  R R  L+ F++SCD  GKLI+KP   
Sbjct: 77  TTHLDFTLCFFVGLLLFAVFGVHRRIVAPTIVARRCRDALSPFSLSCDHNGKLIVKPAVR 136

Query: 402 NSS 410
           NS+
Sbjct: 137 NSA 139


>AL021571-6|CAN99719.1|  142|Caenorhabditis elegans Hypothetical
           protein T19A6.3b protein.
          Length = 142

 Score = 86.2 bits (204), Expect = 1e-17
 Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
 Frame = +3

Query: 54  DDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVV-----SLTQ 218
           +DLK FE+RLTEVI  + P   RWRI + I +V   +    +  + L  +       +  
Sbjct: 17  EDLKFFEKRLTEVITYMGPTCTRWRIAIVIFAVLVGVIGSKYFANELQKIEIFQIPMIDM 76

Query: 219 SLWNHPFFAVTSTLLVLLFMI-GVHTKVVAPSIITARTRSILNDFNMSCDDTGKLILKPR 395
            L  H  F +   + +LLF + GVH ++VAP+I+  R R  L+ F++SCD  GKLI+KP 
Sbjct: 77  FLTTHLDFTLCFFVGLLLFAVFGVHRRIVAPTIVARRCRDALSPFSLSCDHNGKLIVKPA 136

Query: 396 PANSS 410
             NS+
Sbjct: 137 VRNSA 141


>Z11126-7|CAO82061.1|  522|Caenorhabditis elegans Hypothetical
           protein ZK643.3b protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 19/87 (21%), Positives = 38/87 (43%)
 Frame = +3

Query: 24  K*CRSNKLLVDDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPV 203
           K CRSN     ++ A  R  T+   C+    +  RIL  +++   ++      + P   +
Sbjct: 188 KVCRSNGWATPEVNAAAREHTDYTGCMSNGDVEARILAGLLTYSASVI----FLIPAVFL 243

Query: 204 VSLTQSLWNHPFFAVTSTLLVLLFMIG 284
           ++L + +   P F +   LL+   + G
Sbjct: 244 LTLLRPIRCQPMFILHRHLLISCLLYG 270


>Z11126-6|CAA77471.2|  480|Caenorhabditis elegans Hypothetical
           protein ZK643.3a protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 19/87 (21%), Positives = 38/87 (43%)
 Frame = +3

Query: 24  K*CRSNKLLVDDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPV 203
           K CRSN     ++ A  R  T+   C+    +  RIL  +++   ++      + P   +
Sbjct: 188 KVCRSNGWATPEVNAAAREHTDYTGCMSNGDVEARILAGLLTYSASVI----FLIPAVFL 243

Query: 204 VSLTQSLWNHPFFAVTSTLLVLLFMIG 284
           ++L + +   P F +   LL+   + G
Sbjct: 244 LTLLRPIRCQPMFILHRHLLISCLLYG 270


>Z68493-8|CAA92795.1|  336|Caenorhabditis elegans Hypothetical
           protein C33A12.11 protein.
          Length = 336

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +3

Query: 141 IVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHPFFAVTSTLLVLLF 275
           I S C +IA  HWL   L   +  T      PF      +L++LF
Sbjct: 99  ISSFCASIAPNHWLKLILFLALYFTYLAMAFPFLVPVVPILIVLF 143


>AB069909-1|BAB62876.1|  747|Caenorhabditis elegans junctophilin
           protein.
          Length = 747

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
 Frame = +3

Query: 33  RSNKLLVDDLKAFERRLTEVIACLQPA----TMRWRI--LLTIVSVCTAIAAYHWL 182
           R  ++L ++ +A   R   +   LQPA     +RWRI  LL I ++   +  YHWL
Sbjct: 682 RRQEVLRENEEAALLRANPLRHFLQPAFRAWLVRWRIPILLAIANISLLMLFYHWL 737


>U64853-4|AAB04977.1|  286|Caenorhabditis elegans Egg laying
           defective protein 46 protein.
          Length = 286

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 234 DDSTKTV*ARLQVSEDPSTNGMLLLLYKLTQLSVEFSISL 115
           D ST+TV   L +  +P+    +L LY++ Q  ++FS  L
Sbjct: 41  DCSTQTVFPTLPMFWNPTLVQQMLALYQIQQQQIQFSAKL 80


>AF283983-1|AAG13398.1|  286|Caenorhabditis elegans C2H2 zinc finger
           protein EGL-46 protein.
          Length = 286

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 234 DDSTKTV*ARLQVSEDPSTNGMLLLLYKLTQLSVEFSISL 115
           D ST+TV   L +  +P+    +L LY++ Q  ++FS  L
Sbjct: 41  DCSTQTVFPTLPMFWNPTLVQQMLALYQIQQQQIQFSAKL 80


>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical protein
            F55B11.1 protein.
          Length = 1358

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +2

Query: 128  NSTDNCVSLYSNSSIPLVDGSSDTCSLAHTVFVESSLFCCDLYIIGFAIHDWSTYK 295
            N     V +Y++ S+ +  G  +     HT  ++ +  C ++ I    IHD ST K
Sbjct: 1042 NQAGALVLVYTDGSVLVSHGGMEMGQGLHTKILQIAARCLEIPIERIHIHDTSTDK 1097


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,115,980
Number of Sequences: 27780
Number of extensions: 201309
Number of successful extensions: 643
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)