Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_O20
         (644 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733     30   1.4  
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129...    29   2.4  
02_03_0349 + 18010414-18014283                                         29   3.2  
01_06_1259 - 35810926-35811777                                         29   4.2  
03_04_0184 - 18210875-18212065                                         28   5.5  
10_05_0047 + 8524345-8524414,8524687-8524776,8525004-8525306,852...    27   9.7  
09_02_0387 - 8375043-8375831,8376483-8376785,8414151-8414273           27   9.7  
07_03_0072 - 13051145-13052362                                         27   9.7  
03_06_0682 - 35516081-35518303                                         27   9.7  

>04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733
          Length = 760

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
 Frame = +1

Query: 100 YRDQELKDAAWAEVMKE-TDLS---SVKEVKLKWKKLRDSYRARAEETKRDASQRSKQSY 267
           +RD  LK   W EV ++  +L    S K+ K K++ +   Y+ R +E +  A ++  +SY
Sbjct: 119 FRDATLKGPLWEEVSRKLAELGYKRSAKKCKEKFENVHKYYK-RTKEGR--AGRQDGKSY 175

Query: 268 QKVVSLE-IHGTDAIPTTIHEQ*EKTRRITSIFSTGSQARKWSP 396
           +    LE +H   A P T   Q ++ +++  + S+      ++P
Sbjct: 176 RFFTELEALHA--AAPQTPQPQQQQQQQLPPVTSSAPAMHAFAP 217


>10_08_0630 -
           19410852-19411235,19411370-19412257,19412440-19412941,
           19413662-19414135,19414982-19415040,19415468-19415629
          Length = 822

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
 Frame = +1

Query: 100 YRDQELKDAAWAEVMK----ETDLSSVKEVKLKWKKLRDSYRARAEETKRDASQRSKQSY 267
           +RD  LK   W EV +    E    S K+ K K++ +   Y+ R +E++  A +   ++Y
Sbjct: 217 FRDATLKGPLWEEVSRKLAEEGYRRSAKKCKEKFENVHKYYK-RTKESR--AGRNDGKTY 273

Query: 268 QKVVSLE-IHGTDA 306
           +    LE +HGT A
Sbjct: 274 RFFTQLEALHGTAA 287


>02_03_0349 + 18010414-18014283
          Length = 1289

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 333 GKNPSNHQYIQHR*SSKKMVTNITGKPIVLR 425
           G NP +++ +QH   SKKMV+ ++G P+  +
Sbjct: 374 GVNPDDYRNLQH--ISKKMVSKLSGSPLAAK 402


>01_06_1259 - 35810926-35811777
          Length = 283

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 40  EHFIETVRKYPCLWNTTAIEYRDQELKDAAWAEV 141
           +HF+  V KY    N  ++ Y+D + +D  W EV
Sbjct: 72  KHFVGKVDKYDSESNWYSVVYQDGDQEDLEWKEV 105


>03_04_0184 - 18210875-18212065
          Length = 396

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 118 KDAAWAEVMKETDLSSVK-EVKLKWKKLRDSYRARAEETKRDASQRSKQ 261
           K+A WAE++KE DL   + E    W  +   +  R+E    D+  +SK+
Sbjct: 323 KEAVWAEIVKENDLMDTELEEITNWWFVDAVFGVRSEHL--DSMNKSKE 369


>10_05_0047 +
           8524345-8524414,8524687-8524776,8525004-8525306,
           8525413-8525872,8525962-8526043,8526157-8526351
          Length = 399

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +1

Query: 103 RDQELKDAAWAEVMKETDLSSVKEVKLKWKKLRDSYRARAEETKRDASQRSKQSYQKV 276
           R  ELK+   +E  +E  L    +   +  K+  + R  AEE +R A ++ ++  +++
Sbjct: 329 RQMELKEGDNSERKREKALEEYNDEITRINKVAAASRLTAEEKRRSAERKVREKAERI 386


>09_02_0387 - 8375043-8375831,8376483-8376785,8414151-8414273
          Length = 404

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 103 RDQELK-DAAWAEVMKETDLSSVKEVKLKWKKLRDSYRARAEETKRDASQRSKQSYQK 273
           RD++L+  +AW E   +    + ++    W+++ D+Y A  E+ ++   +  K  + K
Sbjct: 136 RDEDLRLVSAWLENSTDPIEGNARKGDTYWRQVADTYNATTEDDRKRDPKHLKGHWHK 193


>07_03_0072 - 13051145-13052362
          Length = 405

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +3

Query: 129 LGRSHEGDRSVVGQRSKIKMEETSR*LQGTR*RDKTRC*PKIQAILPKSRIPG 287
           LG +   DR  +      + E   R L+G   R +  C P+ +A +P+ R+PG
Sbjct: 43  LGAAERSDRQAMTFLLPRQHEFKQR-LRGANSRRRMSCLPQPKAAIPRGRLPG 94


>03_06_0682 - 35516081-35518303
          Length = 740

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 357 YIQHR*SSKKMVTNITGKPIVLRSRSPKXNHHLKE 461
           Y+QH  S   ++T    K +      PK  HHLK+
Sbjct: 298 YVQHGGSGSSVLTTTRDKTVAEIMAPPKEVHHLKD 332


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,979,701
Number of Sequences: 37544
Number of extensions: 350426
Number of successful extensions: 980
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)