Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_O20
(644 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g48110.1 68414.m05369 expressed protein contains Pfam profile... 33 0.12
At3g17520.1 68416.m02238 late embryogenesis abundant domain-cont... 31 0.87
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 30 1.5
At5g51290.1 68418.m06358 ceramide kinase-related contains weak s... 29 2.0
At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative simila... 29 2.0
At5g01380.1 68418.m00051 expressed protein 29 2.6
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 29 3.5
At5g06220.1 68418.m00694 expressed protein 28 4.6
At2g44670.1 68415.m05559 senescence-associated protein-related s... 28 4.6
At5g45510.1 68418.m05590 leucine-rich repeat family protein cont... 28 6.1
At4g34490.1 68417.m04903 cyclase-associated protein (cap1) ident... 28 6.1
At3g22790.1 68416.m02873 kinase interacting family protein simil... 28 6.1
At2g47330.1 68415.m05908 DEAD/DEAH box helicase, putative simila... 28 6.1
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 28 6.1
At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related simil... 28 6.1
At5g47660.1 68418.m05884 DNA-binding protein-related similar to ... 27 8.1
>At1g48110.1 68414.m05369 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 639
Score = 33.5 bits (73), Expect = 0.12
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Frame = +1
Query: 145 KETDLSSVKE---VKLKWKKLRDSYRARAEETKRDASQRSKQSYQKVVS---LEIHGTDA 306
K+T L S K+ + K ++L E T ++ ++ S QK +S ++ GTD+
Sbjct: 513 KKTPLESFKKPSVISAKTEELPSKSEGNEETTVKEGNEEDTSSTQKKISSLTIDPSGTDS 572
Query: 307 IPTTIHEQ*EKTRRITSIFSTGSQARKWSPT 399
PTT+ +K++ + S+GS +K P+
Sbjct: 573 NPTTVSHLNQKSQAKSKPNSSGS-LKKTDPS 602
>At3g17520.1 68416.m02238 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to PIR|S04045|S04045 embryonic
abundant protein D-29 [Gossypium hirsutum]; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 298
Score = 30.7 bits (66), Expect = 0.87
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 133 AEVMKETDLSSVKEVKLKWKKLRDSYRARAEETKRDASQRSKQSYQKVVSLEIHGTDAI 309
AE +KE K K K K+ ++ +++A+ET A ++ QSY D +
Sbjct: 222 AEKLKEEAERESKSAKEKIKESYETAKSKADETLESAKDKASQSYDSAARKSEEAKDTV 280
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 145 KETDLSSVKEVKLKWKKLRDSYRARAEETKRDASQRSKQSYQKVVSLEIHGTDAIPTTI 321
K LS V K++++ R ++ ++ R +Q +Y+K + L++HG D +P I
Sbjct: 472 KAEKLSLVDHSKIEYEPFRKNFYIEVKDISR-MTQEEVNTYRKELELKVHGKD-VPRPI 528
>At5g51290.1 68418.m06358 ceramide kinase-related contains weak
similarity to ceramide kinases (GI:21624342) [Mus
musculus]
Length = 608
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 43 HFIETVRKYPCLWNTTAIEYRDQELKDA-AWAEVMKETDLSSVKEVK 180
H ++ K PCLWN A + +L+ +W M + + S +KEV+
Sbjct: 117 HGFQSSPKEPCLWNLAAFTFGHMDLQTCQSW---MDQLNYSLIKEVE 160
>At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative similar
to RNA helicase GB:A57514 GI:897915 from [Rattus
norvegicus]; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 989
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +1
Query: 145 KETDLSSVKEVKLKWKKLRDSYRARAEETKRDASQRSKQSYQKVVSLEIHGTDAIPTTI 321
K LS V K++++ R ++ ++ R +Q + +Y+K + L++HG D +P I
Sbjct: 339 KAEKLSLVDHSKIEYEPFRKNFYIEVKDISR-MTQDAVNAYRKELELKVHGKD-VPRPI 395
>At5g01380.1 68418.m00051 expressed protein
Length = 323
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +1
Query: 103 RDQELKDAAWAEVMKETDLSSVKEVKLKWKKLRDSYRARAEETKRDASQRSKQSYQKVVS 282
R++ L + A++ + + S ++ K KWK L Y+A E T+ DA ++ Y ++ S
Sbjct: 76 RNKLLWEVVAAKMADKGFVRSAEQCKSKWKNLVTRYKA-CETTEPDAIRQQFPFYNEIQS 134
Query: 283 L 285
+
Sbjct: 135 I 135
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = +1
Query: 172 EVKLKWKKLRDSYRARAEETKRDASQRSKQSYQKVVSLEIHGTDAIPTTIHEQ*EKTRRI 351
E K + K RD+ + R S+ + +++V + G + + E E R+
Sbjct: 355 ESKSSYIKTRDNTQTEENRGNRAVSETQFKKIKEMVEQGLAGPEMAIKKLEESGELGNRV 414
Query: 352 TSIFSTGSQARKW 390
T + ARKW
Sbjct: 415 TRLAKEIDSARKW 427
>At5g06220.1 68418.m00694 expressed protein
Length = 813
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +1
Query: 151 TDLSSVKEVKLKWKKLRDSYRARAEETKRDASQRSKQSYQKVVSLEIHGTD 303
+DL ++++K + + L S+RA+A + Q Y + S + G D
Sbjct: 526 SDLEKIRKLKKEAEFLEASFRAKAASLQEGGGDSDSQEYSEEQSQYLRGKD 576
>At2g44670.1 68415.m05559 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana];
Length = 93
Score = 28.3 bits (60), Expect = 4.6
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 43 HFIETV---RKYPCLWNTTAIEYRDQELKDAAWAEVMKETDLSSVKEVKLKWKKLRDSYR 213
HF+E+ RK+ L N+ YR + A + +E + S + + KWKK S R
Sbjct: 15 HFLESCSLCRKHLGL-NSDIFMYRGDK---AFCSNECREEQIESDEAKERKWKKSSRSLR 70
Query: 214 ARAEETKRDASQRSKQSYQKVVS 282
+ ETK A+ + ++ VV+
Sbjct: 71 KNSSETKESAAGNTVRTGTLVVA 93
>At5g45510.1 68418.m05590 leucine-rich repeat family protein contains
leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 1222
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 199 RDSYRARAEETKRDASQRSKQSYQKVVSLEIHGTDAIPTTIHE 327
RD++R E+ +RD S+ + S V+S EI T+ P I E
Sbjct: 969 RDTWREIKEDIERDRSENASSSDAVVISQEI--TEKKPVEIRE 1009
>At4g34490.1 68417.m04903 cyclase-associated protein (cap1)
identical to cyclase-associated protein (cap1)
GI:3169136 from [Arabidopsis thaliana]
Length = 476
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 82 NTTAIEYRDQELKDAAWAEVMKETDLSSVKE 174
N +EYR+++ WA+ +KE L ++E
Sbjct: 177 NKVLVEYRNKDADHVEWAKALKELYLPGLRE 207
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 27.9 bits (59), Expect = 6.1
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +1
Query: 85 TTAIEYRDQELKDAAWAEVMKETDLSSVKEVKLKWKKLRDSYRARAEETKRDAS--QRSK 258
T+ ++ R L+D + E D+SSVKE +L DS E K + S + K
Sbjct: 467 TSELQSRIGMLRDLETRNLKLEGDISSVKEENQNLSELNDSSMIFLETQKCEISSLKEIK 526
Query: 259 QSYQKVVSLEIHGTDAIPTTI 321
+ ++ V+ I+ + A I
Sbjct: 527 EKLEEEVARHINQSSAFQEEI 547
>At2g47330.1 68415.m05908 DEAD/DEAH box helicase, putative similar
to RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 760
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 209 TGHALKRQNEMLAKDPSNPTKKSYPWKYMGPMQFLQPYMSNRKKPVESPVYSAPVVKQEN 388
TG + +N +A PSNP ++YP K M F+ + + PV +N
Sbjct: 673 TGVMAQFKNSFVAATPSNPQNQAYPNKRPSLMGFVSGGTIGGDMG-RTQSQAPPVAPTQN 731
Query: 389 GHQHN 403
HN
Sbjct: 732 ASSHN 736
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 27.9 bits (59), Expect = 6.1
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +1
Query: 190 KKLRDSYRARAEETKRDASQRSKQSYQKVVSLEIHGTDAIPTTIHEQ*EKTRRITSIFST 369
K L S R RAE+ + S+ S + YQ +I ++ P + + + SI S
Sbjct: 714 KDLLSSTRQRAEKFRSFNSRSSMKKYQSEEDEDI--SEQKPRAKDKAASGQQSVGSISSR 771
Query: 370 GSQARKWSP 396
SQARK P
Sbjct: 772 SSQARKLQP 780
>At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related similar
to U2 small nuclear ribonucleoprotein auxiliary factor
35 kD subunit related protein 1 (sp|Q15695)
Length = 757
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 145 KETDLSSVKEVKLKWKKLRDSYRARAEE--TKRDASQRSKQSYQKVVSLEIHGTD 303
+E +L +E + W++ + R + EE KR+ +R + +++ LE G D
Sbjct: 86 REKELKDFEESERAWREAMEIKRKKEEEEEAKREEEERRWKDLEELRKLEASGND 140
>At5g47660.1 68418.m05884 DNA-binding protein-related similar to
GTL1 [Arabidopsis thaliana] GI:2664198
Length = 398
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +1
Query: 118 KDAAWAEV---MKETDLS-SVKEVKLKWKKLRDSYRARAEETKRDASQRSKQSY 267
K A W E+ MKE S K+ K KW+ + YR E ++ +SY
Sbjct: 327 KGAIWDEISARMKERGYERSAKKCKEKWENMNKYYRRVTEGGQKQPEHSKTRSY 380
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,589,602
Number of Sequences: 28952
Number of extensions: 281220
Number of successful extensions: 795
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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