Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_O17
(624 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 161 4e-40
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 161 5e-40
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 145 2e-35
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 134 4e-32
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 128 3e-30
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 112 2e-25
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 100 1e-21
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 31 0.98
07_03_1666 + 28482262-28482385,28482475-28482992 29 4.0
09_03_0125 - 12531409-12531442,12531577-12531668,12531747-125323... 28 5.2
03_03_0278 - 16126803-16129049 28 5.2
09_01_0101 - 1558889-1558989,1559105-1559214,1559300-1559396,156... 27 9.2
08_02_1628 + 28363476-28363517,28363624-28363791,28363863-283639... 27 9.2
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 161 bits (391), Expect = 4e-40
Identities = 73/98 (74%), Positives = 85/98 (86%)
Frame = +2
Query: 296 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHLEGGAKKVIISAPS 475
+L +NG K+ + S+RDP IPWG GAEYVV S+GVFTTT+KASAHL+GGAKKV+ISAPS
Sbjct: 202 TLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISAPS 261
Query: 476 ADAPMFVVGVNLQXYDPSLKVISNASCTTNCLAPLAKV 589
ADAPMFVVGVN + YDP + V+SNASCTTNCLAPLAKV
Sbjct: 262 ADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKV 299
Score = 61.3 bits (142), Expect = 6e-10
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1
Query: 184 QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQD 291
+VVA+NDPFI YM Y+FKYDSTHG FKGS++V D
Sbjct: 164 EVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVVD 199
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 111 SKIGINGFGRIGRLVLR 161
+K+GINGFGRIGRLVLR
Sbjct: 139 TKVGINGFGRIGRLVLR 155
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 161 bits (390), Expect = 5e-40
Identities = 73/98 (74%), Positives = 87/98 (88%)
Frame = +2
Query: 296 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHLEGGAKKVIISAPS 475
+L +NG KI+V S+RDP IPWG GAEYVV S+GVFTTT+KASAHL+GGA+KV+ISAPS
Sbjct: 143 TLEINGKKISVTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAHLKGGARKVVISAPS 202
Query: 476 ADAPMFVVGVNLQXYDPSLKVISNASCTTNCLAPLAKV 589
ADAPMFVVGVN + Y+PS+ V+SNASCTTNCLAPLAK+
Sbjct: 203 ADAPMFVVGVNEKNYNPSMNVVSNASCTTNCLAPLAKI 240
Score = 60.1 bits (139), Expect = 1e-09
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +1
Query: 184 QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQD 291
+VVA+NDPFI YM Y+FKYDSTHG FKG+++V D
Sbjct: 105 EVVAVNDPFIDAKYMAYMFKYDSTHGPFKGTIKVVD 140
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 111 SKIGINGFGRIGRLVLR 161
+K+GINGFGRIGRLVLR
Sbjct: 80 TKVGINGFGRIGRLVLR 96
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 145 bits (352), Expect = 2e-35
Identities = 66/98 (67%), Positives = 80/98 (81%)
Frame = +2
Query: 296 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHLEGGAKKVIISAPS 475
+LL ++ VF R+P+ IPWG+ GAE+VV STGVFT DKA+AHL+GGAKKV+ISAPS
Sbjct: 116 TLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 175
Query: 476 ADAPMFVVGVNLQXYDPSLKVISNASCTTNCLAPLAKV 589
DAPMFVVGVN + Y P + ++SNASCTTNCLAPLAKV
Sbjct: 176 KDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKV 213
Score = 34.3 bits (75), Expect = 0.080
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 114 KIGINGFGRIGRLVLR 161
KIGINGFGRIGRLV R
Sbjct: 5 KIGINGFGRIGRLVAR 20
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 184 QVVAINDPFIGLDYMVYLF 240
++VA+NDPFI DYM+ F
Sbjct: 29 ELVAVNDPFITTDYMICEF 47
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/23 (47%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +1
Query: 226 MVYLFKYDSTHGRFK-GSVEVQD 291
+ Y+FKYD+ HG++K V+V+D
Sbjct: 91 VTYMFKYDTVHGQWKHHEVKVKD 113
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 134 bits (325), Expect = 4e-32
Identities = 63/96 (65%), Positives = 72/96 (75%)
Frame = +2
Query: 335 ERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGVNLQ 514
ER+P IPW +AGAEYVV STGVFT +KA+AHL+GGAKKV+ISAPS DAPMFV GVN
Sbjct: 104 ERNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNED 163
Query: 515 XYDPSLKVISNASCTTNCLAPLAKVFMITLKFFXGL 622
Y + ++SNASCTTNCLAPLAKV GL
Sbjct: 164 KYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGL 199
Score = 51.6 bits (118), Expect = 5e-07
Identities = 20/37 (54%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
Frame = +1
Query: 184 QVVAINDPFIGLDYMVYLFKYDSTHGRFKGS-VEVQD 291
++VA+NDPFI DYM Y+FKYD+ HG++K S ++++D
Sbjct: 29 ELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKD 65
Score = 34.3 bits (75), Expect = 0.080
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 114 KIGINGFGRIGRLVLR 161
KIGINGFGRIGRLV R
Sbjct: 5 KIGINGFGRIGRLVAR 20
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 128 bits (310), Expect = 3e-30
Identities = 66/112 (58%), Positives = 79/112 (70%), Gaps = 14/112 (12%)
Frame = +2
Query: 296 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHL------------- 436
+L+ ++AVF R+P+ IPW AGAEYVV STGVFT DKA+AHL
Sbjct: 73 TLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGQAVDLFSIIFH 132
Query: 437 -EGGAKKVIISAPSADAPMFVVGVNLQXYDPSLKVISNASCTTNCLAPLAKV 589
+GGAKKV+ISAPS DAPMFVVGVN + Y + ++SNASCTTNCLAPLAKV
Sbjct: 133 MQGGAKKVVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKV 184
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/37 (54%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Frame = +1
Query: 184 QVVAINDPFIGLDYMVYLFKYDSTHGRFK-GSVEVQD 291
++VA+NDPFI +YM Y+FKYD+ HG++K V+V+D
Sbjct: 34 ELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVKVKD 70
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 112 bits (269), Expect = 2e-25
Identities = 50/100 (50%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Frame = +2
Query: 293 DSLLVNGNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHLEGGAKKVIISAP 472
+++ V+G I V S+R+P +PWG+ G + V+ TGVF D A H++ GAKKV+I+AP
Sbjct: 131 NAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAP 190
Query: 473 -SADAPMFVVGVNLQXYDPSLKVISNASCTTNCLAPLAKV 589
D P +VVGVN Y P +ISNASCTTNCLAP K+
Sbjct: 191 GKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKI 230
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 114 KIGINGFGRIGRLVLRCFY*KGSSS 188
K+ INGFGRIGR LRC++ +G SS
Sbjct: 68 KVAINGFGRIGRNFLRCWHGRGDSS 92
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 100 bits (239), Expect = 1e-21
Identities = 49/101 (48%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Frame = +2
Query: 296 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHLEGGAKKVIISAPS 475
++ V+G I V S RDP +PW + G + V+ TGVF A H++ GAKKVII+AP+
Sbjct: 142 TISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 201
Query: 476 --ADAPMFVVGVNLQXYDPSL-KVISNASCTTNCLAPLAKV 589
AD P +V+GVN Y + +ISNASCTTNCLAP K+
Sbjct: 202 KGADIPTYVLGVNEGDYSHEVANIISNASCTTNCLAPFVKI 242
Score = 34.3 bits (75), Expect = 0.080
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 99 ADNMSKIGINGFGRIGRLVLRCFY*KGSS 185
A+ K+ INGFGRIGR LRC++ + +S
Sbjct: 74 AEAKLKVAINGFGRIGRNFLRCWHERENS 102
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 311 GNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDK 421
GNK+ D + + WGK E + G+ T+T+K
Sbjct: 445 GNKVDEMKSGDRQHLWWGKRNVEQITEKLGLLTSTEK 481
>07_03_1666 + 28482262-28482385,28482475-28482992
Length = 213
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -1
Query: 507 LTPTTNMGASALGADIITFLAPPSK*ADALSVVVKTPVDXTTYSAPAFPHG 355
+T + MG+ G+ + + PP + S+ TT AP PHG
Sbjct: 81 VTSSEMMGSLMSGSGRVAVITPPPAASGGASLPAAAAAGGTTLVAPVVPHG 131
>09_03_0125 -
12531409-12531442,12531577-12531668,12531747-12532337,
12532454-12532789,12532899-12533156,12533867-12533971,
12534625-12534702,12535464-12535542,12535649-12535723,
12535828-12535946,12536042-12537106
Length = 943
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = -1
Query: 501 PTTNMGASALGADIITFLAPPSK*ADALSVVVKTPVDXTTYSAPAFPHGMALGSLSEKTA 322
PTT AS + + T APP + L TP +T PH + L + A
Sbjct: 21 PTTG-AASLVSSSPSTSTAPPPRKKPRLPAAALTPTPRSTAPFAPIPHRVLLAGVLSLPA 79
Query: 321 ILLPLTSKESILNLN 277
P+ + L+L+
Sbjct: 80 SGSPVACRSHCLSLS 94
>03_03_0278 - 16126803-16129049
Length = 748
Score = 28.3 bits (60), Expect = 5.2
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 538 HLKCFLHHKLSCPTCK 585
+LK +L+H L CPTC+
Sbjct: 220 YLKVYLNHNLLCPTCR 235
>09_01_0101 -
1558889-1558989,1559105-1559214,1559300-1559396,
1560462-1560537,1561577-1561666,1561972-1562070
Length = 190
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 151 WCSAASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRF 267
W + A + ++VA+ND FI +YMV L + +F
Sbjct: 38 WEALALQSEYVELVAVNDSFITTEYMVTLDLAKGVYAKF 76
>08_02_1628 +
28363476-28363517,28363624-28363791,28363863-28363937,
28364018-28364070,28364559-28364709,28365079-28365261,
28366110-28366236,28366731-28366831,28367156-28367294,
28367359-28367420,28367702-28367754,28368266-28368290
Length = 392
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 507 LTPTTNMGASALGADIITFLAPPSK*ADALSVVVKTPV 394
L TT G + +GA + F++ PSK SVVV V
Sbjct: 330 LIDTTGAGDAFIGAVLYAFVSGPSKFCSVKSVVVNLAV 367
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,002,049
Number of Sequences: 37544
Number of extensions: 355754
Number of successful extensions: 849
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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