Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_O13
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118621-1|AAM49990.1| 1168|Drosophila melanogaster RE03558p pro...    28   9.6  
AE014296-813|AAF47875.2| 1168|Drosophila melanogaster CG1273-PB ...    28   9.6  

>AY118621-1|AAM49990.1| 1168|Drosophila melanogaster RE03558p
           protein.
          Length = 1168

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 9/55 (16%)
 Frame = +3

Query: 111 KRSTMDYIVGSVAALVSGNVTPN-----RPRLLKR---PLTPTKH-QPSPNVTPK 248
           KR   + +V S A L      P        RL+K+   P TP  H +P+PN TPK
Sbjct: 251 KRIMDEQVVRSAAILKEAQTVPTSQTQLEKRLMKKGSTPATPPVHPKPNPNTTPK 305


>AE014296-813|AAF47875.2| 1168|Drosophila melanogaster CG1273-PB
           protein.
          Length = 1168

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 9/55 (16%)
 Frame = +3

Query: 111 KRSTMDYIVGSVAALVSGNVTPN-----RPRLLKR---PLTPTKH-QPSPNVTPK 248
           KR   + +V S A L      P        RL+K+   P TP  H +P+PN TPK
Sbjct: 251 KRIMDEQVVRSAAILKEAQTVPTSQTQLEKRLMKKGSTPATPPVHPKPNPNTTPK 305


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,127,062
Number of Sequences: 53049
Number of extensions: 488184
Number of successful extensions: 1295
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)