Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_O12
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    46   4e-07
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    46   4e-07

>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 45.6 bits (103), Expect = 4e-07
 Identities = 26/75 (34%), Positives = 37/75 (49%)
 Frame = +1

Query: 427 LPPEPXLWTXEDVSVFLKWCERXFDLPNFDMDLFQMNGKALCLLTKTXLGERCPAAXDVL 606
           LP +P  WT E V+ ++    +   LP      F MNGKALCL++      R P    +L
Sbjct: 32  LPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFLMNGKALCLMSLGMFLSRVPLGGKLL 91

Query: 607 HNVLQMLVRDAALLG 651
           +   Q+ +  AAL G
Sbjct: 92  YKDFQLRL-CAALYG 105


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 45.6 bits (103), Expect = 4e-07
 Identities = 26/75 (34%), Positives = 37/75 (49%)
 Frame = +1

Query: 427 LPPEPXLWTXEDVSVFLKWCERXFDLPNFDMDLFQMNGKALCLLTKTXLGERCPAAXDVL 606
           LP +P  WT E V+ ++    +   LP      F MNGKALCL++      R P    +L
Sbjct: 32  LPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFLMNGKALCLMSLGMFLSRVPLGGKLL 91

Query: 607 HNVLQMLVRDAALLG 651
           +   Q+ +  AAL G
Sbjct: 92  YKDFQLRL-CAALYG 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,860
Number of Sequences: 336
Number of extensions: 2674
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)