Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_O12
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0480 - 3676529-3676687,3676767-3676931,3677044-3677220,367...    28   5.6  
07_01_0057 + 431084-431105,431149-431297,431380-431526,431622-43...    27   9.9  
06_03_1496 - 30567968-30568210,30568345-30568513,30568635-305687...    27   9.9  
01_04_0049 - 15422996-15423407,15423954-15424114                       27   9.9  

>03_01_0480 -
           3676529-3676687,3676767-3676931,3677044-3677220,
           3678170-3678273,3678700-3678843,3679831-3679898,
           3680059-3680162,3680759-3680767,3681572-3681657,
           3681918-3683373
          Length = 823

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 539 VKHYACLLKXIWVKGVLQXAMSYIMFFKC 625
           +KHY C++  +   G+L+ A  +I   KC
Sbjct: 384 IKHYGCMVDMLGRAGLLKEAFEFIDTMKC 412


>07_01_0057 +
           431084-431105,431149-431297,431380-431526,431622-431752,
           431791-431894,432949-433128,433481-433581,434030-434185,
           434679-434731,434818-434875,435162-435282,436010-436215
          Length = 475

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = -2

Query: 553 SIMLY--RSFERGPYQN*VDRIXFHTISEIQKHPLWSIVLVLAEDRLAVAXWCHQAVKEA 380
           SI L+  R  ++GP Q+    I  HT   +   P  ++++   EDR+ V  W  +  ++ 
Sbjct: 367 SIKLFDLRLIQKGPIQSYAGHINSHTHLPLVVDPSETLLMSGGEDRM-VRIWSIKTGEQI 425

Query: 379 VAPRVVGNAIIVL 341
            A  V G+    L
Sbjct: 426 FAQSVAGSLFTAL 438


>06_03_1496 - 30567968-30568210,30568345-30568513,30568635-30568736,
            30569087-30571855,30572402-30572430,30572546-30572659,
            30572735-30572846,30574730-30574845,30574928-30575068,
            30575121-30575243,30575346-30575478,30575842-30575972,
            30576065-30576300,30577073-30577376
          Length = 1573

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 608  CKTSXAAGHLSPKXVLVSKHNALPF 534
            CK   AA H+S K V V K N L F
Sbjct: 1103 CKLYSAAAHVSQKWVAVGKKNILHF 1127


>01_04_0049 - 15422996-15423407,15423954-15424114
          Length = 190

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 116 VIPPNVSCYGTP*TSSVSEGTNSQASVSNGSSTXDSN 6
           V+PP++S    P TSS S      AS S+ ++T  S+
Sbjct: 8   VVPPSLSTLVLPHTSSASSYATVAASTSSDNTTASSS 44


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,438,535
Number of Sequences: 37544
Number of extensions: 279842
Number of successful extensions: 777
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)