Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_O08
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   4.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.9  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.6  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 430 FLLPLSPSIRRPSGNWGTSVS 368
           ++ PLS S+R    NWG++ S
Sbjct: 199 YIPPLSTSMRSHLCNWGSANS 219


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 430 FLLPLSPSIRRPSGNWGTSVS 368
           ++ PLS S+R    NWG++ S
Sbjct: 359 YIPPLSTSMRSHLCNWGSANS 379


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 430 FLLPLSPSIRRPSGNWGTSVS 368
           ++ PLS S+R    NWG++ S
Sbjct: 359 YIPPLSTSMRSHLCNWGSANS 379


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 227 SLYAHAELVEPSVSGC 180
           S Y HAELV P    C
Sbjct: 201 SKYKHAELVMPLCKSC 216


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 321 VHPQFSLAVHHALASGETDVPQLPE 395
           VH    +      A G+T +PQ P+
Sbjct: 243 VHEPLLITTEKLAAEGQTKLPQQPK 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,435
Number of Sequences: 336
Number of extensions: 2429
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)