Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_O07
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0204 - 14844634-14844789,14844882-14845418,14846280-14846888     98   5e-21
05_04_0048 - 17493775-17494431,17494506-17494801,17494851-174949...    31   1.1  
11_06_0445 - 23679918-23680282,23680415-23683349                       29   2.4  
03_01_0515 - 3864796-3865425                                           29   2.4  
09_06_0342 + 22410674-22411060,22412219-22412299,22412376-224125...    29   4.3  
02_05_0555 - 29937973-29938395,29938509-29938790                       29   4.3  
02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670     28   5.6  

>11_04_0204 - 14844634-14844789,14844882-14845418,14846280-14846888
          Length = 433

 Score = 98.3 bits (234), Expect = 5e-21
 Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
 Frame = +1

Query: 235 MPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIETLIELGAEVQW-SSSNIYSTQDE 411
           MPGLMACR ++ P++  KGARI+GSLH T+Q AVLIETL  LG         ++      
Sbjct: 1   MPGLMACRAEFGPSQPFKGARISGSLHRTIQAAVLIETLTALGRRGPLVLLQHLLHAGPR 60

Query: 412 XXXXXXXXXIPIYAWKGETDDXYIWCIEQTLIFPDGKPLNMILDDGGDLTNLVH 573
                      ++AWKGET + Y WC E+ L +  G   ++I+DDGGD T L+H
Sbjct: 61  RRPPSPRDSAAVFAWKGETLEEYWWCTERCLDWGVGAGPDLIVDDGGDATLLIH 114


>05_04_0048 -
           17493775-17494431,17494506-17494801,17494851-17494958,
           17495463-17495544,17495561-17495740
          Length = 440

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
 Frame = +1

Query: 208 KEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTV------QTAVLIETLIELGAE 369
           KE+M    E PG++  R     + +++   IA  LH  V      QTA L+  +  L  +
Sbjct: 197 KELMEGVSE-PGVLQSRLSKITSFLVQATSIAAGLHDEVPLQIRGQTAALVTQISGLEQQ 255

Query: 370 VQWSSSNIYSTQDE 411
           V+  S  + ST+DE
Sbjct: 256 VEELSKKLCSTEDE 269


>11_06_0445 - 23679918-23680282,23680415-23683349
          Length = 1099

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 472  DXYIWCIEQTLIFPDGKPLNMILDDGGDLTNLVHTKYPDLLKDV 603
            D Y + I    +    +P + I  DG DL N V + +PD + D+
Sbjct: 991  DVYSYGIIVLEMITGKQPTDEIFQDGMDLHNFVESAFPDQISDI 1034


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
 Frame = -3

Query: 489 TPNILVISFSLPGIDGYSYGNQC-SCGLVLCTINVTAGPLYLCSQFY*SLNKNRCLYCHV 313
           +P   V  +++  +  ++  + C + G  L  +NV +G    CS        N  L  +V
Sbjct: 123 SPVTNVNDYTIQQVGKFAVQSYCLNTGAKLVYVNVVSGQTQPCS----GGGSNYQLVINV 178

Query: 312 *AAGYSGTFEYFSWSIFPTTCHKAWHF 232
            A   +  +  F W I  TT  K W F
Sbjct: 179 AAGVRTAQYSVFVWGILGTTTWKLWSF 205


>09_06_0342 +
           22410674-22411060,22412219-22412299,22412376-22412579,
           22412765-22412959,22413064-22413228,22413501-22413761,
           22413908-22414126,22414285-22414504,22414591-22414613,
           22414728-22414766
          Length = 597

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 21/73 (28%), Positives = 35/73 (47%)
 Frame = +1

Query: 160 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 339
           +PP  +  ++    GR+     EKE   L   +R+   A+IL G R  G+ ++ V+ A +
Sbjct: 33  RPP--LQQQQQVGLGRRGRAREEKERTKLRERQRRAITARILAGLRRHGNYNLRVR-ADI 89

Query: 340 IETLIELGAEVQW 378
            E +  L  E  W
Sbjct: 90  NEVIAALAREAGW 102


>02_05_0555 - 29937973-29938395,29938509-29938790
          Length = 234

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +2

Query: 356 NWEQRYNGPAVTFIVHKTRPQLHWLPXEYPSMPGREKLMTSIF 484
           +WE   +GPA T       P   W P +YP  P +    T ++
Sbjct: 54  HWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVY 96


>02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670
          Length = 197

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +2

Query: 356 NWEQRYNGPAVTFIVHKTRPQLHWLPXEYPSMPGREKLMTSI 481
           +WE   +GP  T     T P   W P EYP  P +    T +
Sbjct: 67  HWEVIIDGPPGTPYAGGTFPVDVWYPNEYPFQPPKLTFKTKV 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,457,890
Number of Sequences: 37544
Number of extensions: 323865
Number of successful extensions: 651
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)