Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_O04
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 43 3e-05
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 38 0.002
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 38 0.002
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 37 0.002
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 36 0.005
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 33 0.036
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 30 0.34
SPBC29A3.17 |gef3||RhoGEF Gef3|Schizosaccharomyces pombe|chr 2||... 29 0.59
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 28 1.4
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 27 1.8
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 27 2.4
SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyce... 27 3.1
SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|c... 27 3.1
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 27 3.1
SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|ch... 26 5.5
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 25 7.2
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 25 7.2
SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4 |Schi... 25 9.5
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 43.2 bits (97), Expect = 3e-05
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +2
Query: 107 LVKAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYVTEYKDASGS 286
L A+Y F G++ +E+ KK +II + QK P+ YVTEYK ++
Sbjct: 1110 LYLALYDFAGRSPNEMTIKKDEIIEIVQKEPSGWWLALKNGAEGWVPATYVTEYKGSTPQ 1169
Query: 287 VTTSPIRAVSE 319
T S ++
Sbjct: 1170 TTASSTNVAAQ 1180
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 37.5 bits (83), Expect = 0.002
Identities = 24/111 (21%), Positives = 54/111 (48%)
Frame = +2
Query: 299 PIRAVSEIQAFRNVVLKDIIXSEKAHVAXMQGLVTNFLHPLEKSEMLTKDEFKQLTGNIN 478
P ++ + A V ++ +E ++ ++ L +N++ L++ ++L++D + N+N
Sbjct: 218 PTGTLNSLIASGRRVTAELYETELKYIQDLEYL-SNYMVILQQKQILSQDTILSIFTNLN 276
Query: 479 EVLQIHEQFLGLLEXSATKTGPXXXVRGLFLQWAPKIKTVHQTYCGGHPKA 631
E+L +FL LE + + + LF+ +V+Q +C P A
Sbjct: 277 EILDFQRRFLVGLEMNLSLPVEEQRLGALFIALEEGF-SVYQVFCTNFPNA 326
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2
Query: 86 KMSAENCLVKAIYSFKGKNNDELCFKKGDIITVTQK 193
K E VKAIYSF G+N EL GD+I V+++
Sbjct: 276 KSKKETVFVKAIYSFTGRNEKELDLHTGDVIQVSEQ 311
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +2
Query: 110 VKAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYV 259
V+A+Y F EL FKKGDII V + FP NYV
Sbjct: 220 VRALYDFAATEQGELSFKKGDIILVLESVYKDWWKGSCKNAVGIFPVNYV 269
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 35.9 bits (79), Expect = 0.005
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 89 MSAENCLVKAIYSFKGKNNDELCFKKGDIITVTQK-XXXXXXXXXXXXXXXXFPSNYVTE 265
+ ++ VKA+Y++ +++ EL ++GDII VT + FP+NYVT+
Sbjct: 582 LDGDSSYVKALYAYTAQSDMELSIQEGDIIQVTNRNAGNGWSEGILNGVTGQFPANYVTD 641
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 33.1 bits (72), Expect = 0.036
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 113 KAIYSFKGKNNDELCFKKGDIITVTQK--XXXXXXXXXXXXXXXXFPSNYV 259
+A+YSF G+ +L F+KGDII + ++ FP+NYV
Sbjct: 377 RAMYSFAGEQPGDLSFQKGDIIDIVERSGSHDDWWTGRIGYREGIFPANYV 427
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 29.9 bits (64), Expect = 0.34
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 104 CLVKAIYSFKGKNNDELCFKKGDII 178
C+V+A+Y++ G+ +L F +GD+I
Sbjct: 9 CMVRALYAWPGEREGDLKFTEGDLI 33
>SPBC29A3.17 |gef3||RhoGEF Gef3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 525
Score = 29.1 bits (62), Expect = 0.59
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 542 PXXXVRGLFLQWAPKIKTVHQTYC 613
P V LFL W PK+ V+ YC
Sbjct: 153 PKPSVAQLFLSWLPKLSAVYGRYC 176
>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 566
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 293 TSPIRAVSEIQAFRNVVLKDIIXSEKAHVAXMQGLVTNFLHPLEKSEMLTKDEFKQL 463
T+P + + F N++ KD+I E A + L N + ++L KDE +L
Sbjct: 419 TTPFKGKNRNMTFSNILHKDVIFPEYADAPSISSLCKNLIR-----KLLVKDENDRL 470
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 363 EXIMSFSTTFRNACISDTARIGDVVTEPDA 274
E I++ S+T R CI D +IG+ T DA
Sbjct: 338 EPILASSSTDRRVCIWDLEKIGEEQTPEDA 367
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 107 LVKAIYSFKGKNNDELCFKKGDIITVTQK 193
+V+ YSF+ + +EL KKGD++ V ++
Sbjct: 425 VVRMKYSFEPETENELKLKKGDLLLVLKE 453
>SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 563
Score = 26.6 bits (56), Expect = 3.1
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 572 QWAPKIKTVHQTYCG 616
Q+ P ++T+H TYCG
Sbjct: 264 QYCPNLQTLHLTYCG 278
>SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 606
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 630 AFGCPPQ*VWCTVLIFGAHCKNNPRTX*XGPVLVALXSNSPKNCS 496
A+ C + C V I+ + KN + PVLVAL P+N S
Sbjct: 482 AYVCDSRDADCVVKIWSEYTKNTGES---SPVLVALVDALPRNAS 523
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 291 QHHLYELCLRYRHSEMWC 344
QHHLY CLR +E C
Sbjct: 531 QHHLYGWCLRLTRTEAGC 548
>SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +1
Query: 151 IMFQKRRYYYCHAKGXRRMVGRHSG*NY-RLVPKQLC 258
+ +RRYYYC + RR Y R PK C
Sbjct: 303 LFLMERRYYYCRQRSVRRKEKTRQLLLYERSAPKNQC 339
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 110 VKAIYSFKGKNNDELCFKKGDIITV 184
V A+Y + +E+ F+KGD I V
Sbjct: 612 VSALYDYDAAIPEEISFRKGDTIAV 636
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 419 LEKSEMLTKDEFKQLTGNINEVLQIHEQFLGLLE 520
+ K EML +FK++ E++Q +Q +G LE
Sbjct: 284 VSKKEMLFTSQFKEIPNVNRELIQSMKQEIGNLE 317
>SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 865
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 150 NYVSKKAILLLSRKRXKEDGGKALWVK 230
NY+SKKA+L R KE ++L+++
Sbjct: 179 NYISKKAVLCALRVIQKEPDLESLYIE 205
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,595,907
Number of Sequences: 5004
Number of extensions: 48076
Number of successful extensions: 143
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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