Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_O04
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0619 - 12205718-12205845,12205941-12206142,12207240-122073...    30   1.9  
02_01_0252 - 1657268-1657692,1657727-1658445,1658761-1659089,165...    29   4.3  
10_05_0051 + 8576660-8576726,8579724-8579888,8579984-8581128           27   9.9  

>02_02_0619 -
           12205718-12205845,12205941-12206142,12207240-12207315,
           12208073-12208278
          Length = 203

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
 Frame = +1

Query: 151 IMFQKRRYYYCHAKGXRRM---VGRHS 222
           +MF+KRR+Y+C+  G +R+    G HS
Sbjct: 110 MMFEKRRWYHCNILGCKRLNDSTGEHS 136


>02_01_0252 - 1657268-1657692,1657727-1658445,1658761-1659089,
            1659223-1659375,1659430-1659561,1659748-1659852,
            1660020-1660193,1660283-1660352,1660458-1660639,
            1660738-1660847,1660948-1661052,1661153-1661231,
            1662128-1662168,1662283-1662358,1662455-1662589
          Length = 944

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
 Frame = +3

Query: 81   LVKCQQKIAWLRQYTLLKVKTMMNYVSKKAILLLSRKRXKEDGGKALWVK-LQAGSQATM 257
            LV C++ IA   Q+TLL V+   + +    ++        E       +K L AGS+  +
Sbjct: 838  LVACREGIALALQWTLLPVQVETDCLVALQMIQAKEVERSELAFAVREIKDLLAGSRECL 897

Query: 258  LLNIKMHQVQ*QHHLYELCLRYRHSEMWC 344
            L  +   Q+   H L         S  WC
Sbjct: 898  LRKVHRSQILVSHMLANKSRSENLSGFWC 926


>10_05_0051 + 8576660-8576726,8579724-8579888,8579984-8581128
          Length = 458

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 410 LHPLEKSEMLTKDEFKQLTGNINEVL 487
           L  +E  ++ TKDE K++T N +EVL
Sbjct: 114 LQKVENIKIFTKDELKKITKNNSEVL 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,972,157
Number of Sequences: 37544
Number of extensions: 283049
Number of successful extensions: 514
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)