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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_O04
         (654 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038)                  40   0.002
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)                       36   0.022
SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.067
SB_29076| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.088
SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12)                 34   0.088
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.12 
SB_42698| Best HMM Match : SH3_1 (HMM E-Value=5.2e-16)                 33   0.20 
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)                       33   0.20 
SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41)             33   0.27 
SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40)             32   0.47 
SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.47 
SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33)                   31   0.62 
SB_36677| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.82 
SB_46196| Best HMM Match : DUF1029 (HMM E-Value=3.6)                   31   0.82 
SB_22304| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16)                 31   1.1  
SB_13346| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05)            30   1.9  
SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20)                   30   1.9  
SB_22307| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_44001| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_4655| Best HMM Match : Spectrin (HMM E-Value=0)                     29   3.3  
SB_54298| Best HMM Match : Keratin_B2 (HMM E-Value=5)                  29   3.3  
SB_34937| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_20708| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.4  
SB_40246| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  

>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 617

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +2

Query: 104 CLVKAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYVTE 265
           C  KAIY ++   +DEL    GDIITVT +                FP++YV E
Sbjct: 563 CQCKAIYDYQATQSDELTIHPGDIITVTARLDNGWWQGDLNNQQGIFPASYVEE 616


>SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038)
          Length = 274

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 28/96 (29%), Positives = 45/96 (46%)
 Frame = +2

Query: 242 FPSNYVTEYKDASGSVTTSPIRAVSEIQAFRNVVLKDIIXSEKAHVAXMQGLVTNFLHPL 421
           FPSNYV E   AS  +   P+   + I    +   +D        V     L+ N+L PL
Sbjct: 18  FPSNYVKEIS-ASPEI---PVTPTTPIPLPLSATKRD-----STRVYHNLALLQNYLKPL 68

Query: 422 EKSEMLTKDEFKQLTGNINEVLQIHEQFLGLLEXSA 529
           + S +L+  + K L GN  E+++  +   G+L+  A
Sbjct: 69  QYSNILSPRDLKVLCGNFEELVRFQQTLFGILDECA 104


>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
          Length = 824

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +2

Query: 104 CLVKAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYVTE 265
           C+VKA +S++  + DEL   KGD+I V +K                FPSNY  +
Sbjct: 205 CIVKAKFSYQPIHVDELQLTKGDLIHVLEKEGDGWWKGFIGTRQGWFPSNYAED 258



 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = +2

Query: 110 VKAIYSFKGKNNDELCFKKGDIITVTQK 193
           V  +Y F+  N++EL F+KG+++ V ++
Sbjct: 271 VITLYQFQSPNSEELNFEKGEVLDVIKQ 298


>SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 793

 Score = 34.7 bits (76), Expect = 0.067
 Identities = 12/30 (40%), Positives = 23/30 (76%)
 Frame = +2

Query: 104 CLVKAIYSFKGKNNDELCFKKGDIITVTQK 193
           C+V+A+Y ++  +++EL F +GD I VT++
Sbjct: 562 CMVRALYDYEAMSDEELSFNEGDTIYVTKQ 591


>SB_29076| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 257

 Score = 34.3 bits (75), Expect = 0.088
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +2

Query: 107 LVKAIYSFKGKNNDELCFKKGDIITVTQK 193
           L KA+Y     + DEL F+KGD+ITV +K
Sbjct: 3   LAKALYDNIADSADELTFRKGDVITVLEK 31


>SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12)
          Length = 979

 Score = 34.3 bits (75), Expect = 0.088
 Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +2

Query: 317 EIQAFRNVVLKDIIXSEKAHVAXMQGLVTNFLHPLEKSE----MLTKDEFKQLTGNINEV 484
           E+   R+ ++ +++ +EK +V  +  +V  +LH  E++     +   D+ + + GNI E+
Sbjct: 408 EVIKKRSQIMAELVTTEKDYVRDLDHIVRGYLHEFERAAGKIPIELFDQRETIFGNIEEI 467

Query: 485 LQIH 496
           L+ H
Sbjct: 468 LEFH 471


>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2143

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +2

Query: 110  VKAIYSFKGKNNDELCFKKGDIITVTQK--XXXXXXXXXXXXXXXXFPSNYVTEYKDASG 283
            V+A+Y +  +  + L FKKGD+I +  K                  FP+ YVT  K+  G
Sbjct: 1516 VRAMYDYVTQEPNLLSFKKGDVIQIIDKPDIEEGWLFGVFASNNGYFPAEYVTHIKEDPG 1575

Query: 284  SV 289
            +V
Sbjct: 1576 TV 1577


>SB_42698| Best HMM Match : SH3_1 (HMM E-Value=5.2e-16)
          Length = 505

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +2

Query: 113 KAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYVTEYKDASGSVT 292
           KA+  F+  ++DEL F+K DIIT+  +                FP+ +V    + S  V+
Sbjct: 123 KALLDFERHDDDELGFRKNDIITIISQKDEHCWVGELNGLRGWFPAKFVQILDERSKEVS 182

Query: 293 TSP 301
             P
Sbjct: 183 LPP 185


>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
          Length = 1034

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +2

Query: 77  NFGKM-SAENCLVKAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSN 253
           NFG   + +    +A+Y F+ +N DEL F  G  I VT+                 FP +
Sbjct: 195 NFGFYENLDITFAEALYGFEARNKDELSFPMGAEIVVTKDVDNDWYEGTFEGDTGLFPKS 254

Query: 254 YV 259
           YV
Sbjct: 255 YV 256



 Score = 33.1 bits (72), Expect = 0.20
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 113 KAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYV 259
           ++IY F  +N+ EL FK+G+II + ++                FP+++V
Sbjct: 277 RSIYPFVAENDSELTFKEGEIIQLRERAGSQWLIGELGGKTGRFPASFV 325


>SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41)
          Length = 689

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 83  GKMSAENCLVKAIYSFKGKNNDELCFKKGDIITVTQK 193
           G ++ +     A+Y ++GK +D L F K DII + ++
Sbjct: 129 GSLAPQGLTAIALYPYRGKKDDMLSFNKNDIIAIKEQ 165


>SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40)
          Length = 313

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +2

Query: 92  SAENCLVKAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYV 259
           S  +  V A+YSF G++ DEL    GD I + +                 FPS+YV
Sbjct: 183 SGSSTEVIALYSFTGESEDELTMWAGDTIQLLEIVNDDWLKGSLNGNTGIFPSSYV 238



 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = +2

Query: 89  MSAENCLVKAIYSFKGKNNDELCFKKGDIITVTQK 193
           +S  +C  KA+Y + G+  D+L F +GD+I + ++
Sbjct: 273 ISGPSC--KALYDYPGEAPDDLTFYQGDVIRLKER 305


>SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 873

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 116 AIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYV 259
           A+Y +  +++ EL FKKGDII V ++                 P++Y+
Sbjct: 722 ALYDYSARSSKELSFKKGDIIRVFKRFNDDWWDGTLGDSDGFVPASYI 769


>SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33)
          Length = 665

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 113 KAIYSFKGKNNDELCFKKGDIITVTQK 193
           K  Y ++ +N DEL  K GDIIT+ +K
Sbjct: 220 KVTYDYEQQNEDELELKVGDIITIVKK 246


>SB_36677| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 168

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 184 HAKGXRRMVGRHSG*NYRLVPKQLCY-*I*RCIRFSDNITYTSC 312
           HA G   MVG H    Y LV +++CY     C R+S+NI   +C
Sbjct: 104 HAPGG--MVGSHPSLRYSLVTRKVCYHWSGSCCRWSNNIKVRNC 145


>SB_46196| Best HMM Match : DUF1029 (HMM E-Value=3.6)
          Length = 448

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 181 CHAKGXRRMVGRHSG*NYRLVPKQLCY-*I*RCIRFSDNITYTSC 312
           C A     MVG H    Y LV +++CY     C R+S+NI   +C
Sbjct: 381 CGAHAPGWMVGSHPSLRYSLVTRKVCYHWSGSCCRWSNNIKVRNC 425


>SB_22304| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 374

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 184 HAKGXRRMVGRHSG*NYRLVPKQLCY-*I*RCIRFSDNITYTSC 312
           HA G   MVG H    Y LV +++CY     C R+S+NI   +C
Sbjct: 310 HAPGW--MVGSHPSLRYSLVTRKVCYHWSGSCCRWSNNIKVRNC 351


>SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16)
          Length = 299

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +2

Query: 110 VKAIYSFKGKNNDELCFKKGDIIT-VTQKXXXXXXXXXXXXXXXXFPSNYV 259
           V A+Y ++   +DEL FK G+I+T ++++                FP+ YV
Sbjct: 246 VLALYDYEAAEDDELSFKAGEIVTKLSERDDQGWCRGRINHRTGLFPAEYV 296


>SB_13346| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 144

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 184 HAKGXRRMVGRHSG*NYRLVPKQLCY-*I*RCIRFSDNITYTSC 312
           HA G   MVG H    Y LV +++CY     C R+S+NI   +C
Sbjct: 80  HAPGW--MVGSHPSLRYSLVTRKVCYHWSGSCCRWSNNIKVRNC 121


>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 955

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 110 VKAIYSFKGKNNDELCFKKGDIITV 184
           V+A+Y  +  N+DEL F +GD+I V
Sbjct: 830 VQALYDCEADNDDELSFMEGDVILV 854


>SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05)
          Length = 452

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 184 HAKGXRRMVGRHSG*NYRLVPKQLCY-*I*RCIRFSDNITYTSC 312
           HA G   MVG H G  Y LV +++CY     C R+S+ I   +C
Sbjct: 249 HAPGW--MVGSHPGLRYSLVTRKVCYHWSGSCCRWSNYIKVRNC 290


>SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20)
          Length = 524

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +2

Query: 110 VKAIYSFKGKNNDELCFKKGDIITVT-QKXXXXXXXXXXXXXXXXFPSNYVTEYKD 274
           V  +Y ++    DEL    GD+ITV  Q                 FPSNY+ E ++
Sbjct: 312 VLVMYPYEANRADELTITPGDVITVLYQDNENWWMGELADGRQGYFPSNYIMEKEE 367


>SB_22307| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 713

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 184 HAKGXRRMVGRHSG*NYRLVPKQLCY-*I*RCIRFSDNITYTSC 312
           HA G   MVG H G  Y LV +++CY     C R+S+ I   +C
Sbjct: 649 HAPGW--MVGSHPGLRYSLVTRKVCYHWSGSCCRWSNYIKVRNC 690



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 184 HAKGXRRMVGRHSG*NYRLVPKQLCY-*I*RCIRFSDNITYTSC 312
           HA G   MVG H   +Y LV +++CY     C R+S+ I   +C
Sbjct: 314 HAPGW--MVGSHPSLHYSLVTRKVCYHWSGSCCRWSNYIKVRNC 355



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 184 HAKGXRRMVGRHSG*NYRLVPKQLCY-*I*RCIRFSDNITYTSC 312
           HA G   MVG H   +Y LV +++CY     C R+S+ I   +C
Sbjct: 446 HAPGW--MVGSHPSLHYSLVTRKVCYHWSGSCCRWSNYIKVRNC 487


>SB_44001| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 123

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 184 HAKGXRRMVGRHSG*NYRLVPKQLCY-*I*RCIRFSDNITYTSC 312
           HA G   MVG H    Y LV +++CY     C R+S+NI   +C
Sbjct: 59  HAPGW--MVGFHPSLRYSLVTRKVCYHWSGSCCRWSNNIKVRNC 100


>SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1427

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 110 VKAIYSFKGKNNDELCFKKGDIITVTQ 190
           V+A++ +  K+   LCF++GD IT+ +
Sbjct: 383 VRAVHGYDSKSPQNLCFEEGDKITLIE 409


>SB_4655| Best HMM Match : Spectrin (HMM E-Value=0)
          Length = 934

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 89  MSAENCLVKAIYSFKGKNNDELCFKKGDIITV 184
           +S + C+V A+Y ++ K   E+  KKGDI+T+
Sbjct: 847 ISDKECVV-ALYDYQEKTAREVSMKKGDILTL 877


>SB_54298| Best HMM Match : Keratin_B2 (HMM E-Value=5)
          Length = 244

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 184 HAKGXRRMVGRHSG*NYRLVPKQLCY-*I*RCIRFSDNITYTSC 312
           HA G   +VG H    Y LV +++CY     C R+S+NI   +C
Sbjct: 180 HAPGW--IVGSHPSLRYSLVTRKVCYHWSGSCCRWSNNIKVRNC 221


>SB_34937| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 131

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 184 HAKGXRRMVGRHSG*NYRLVPKQLCY-*I*RCIRFSDNITYTSC 312
           HA G   +VG H    Y LV +++CY     C R+S+NI   +C
Sbjct: 59  HAPGW--IVGSHPSLRYSLVTRKVCYHWSGSCCRWSNNIKVRNC 100


>SB_20708| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 158

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 184 HAKGXRRMVGRHSG*NYRLVPKQLCY-*I*RCIRFSDNITYTSC 312
           HA G   +VG H    Y LV +++CY     C R+S+NI   +C
Sbjct: 59  HAPGW--IVGSHPSLRYSLVTRKVCYHWSGSCCRWSNNIKVRNC 100


>SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 509

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +2

Query: 89  MSAENCLVKAIYSFKGKNNDELCFKKGDIITV 184
           + AE  L  A+Y ++ + +++L FKKG+ + V
Sbjct: 57  LPAERKLFVALYDYEARTDEDLSFKKGEKLEV 88


>SB_40246| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 748

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 434 MLTKDEFKQLTGNINEVLQIHEQFLGLLEXSATKTGPXXXVRGLFL 571
           +LT  +F ++   I+E+  IH +F   LE       P   +  LFL
Sbjct: 649 ILTVADFNKIFYKIDELFTIHSKFYNDLEARVASWNPNKIIGDLFL 694


>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 739

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 2   DLYFLFIHAECNFXVLNTKNYKWC*NFGKMSAEN 103
           D +  F H  C F   ++ N+ W  N G  S +N
Sbjct: 289 DFFCDFDHGTCGFVQSSSDNFNWIRNTGSTSTQN 322


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,190,508
Number of Sequences: 59808
Number of extensions: 350120
Number of successful extensions: 731
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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