Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_O04
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical pr... 87 8e-18
U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle abno... 47 1e-05
S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein. 47 1e-05
U97407-8|AAN84851.1| 397|Caenorhabditis elegans Prion-like-(q/n... 43 2e-04
U97407-7|AAB52480.2| 457|Caenorhabditis elegans Prion-like-(q/n... 43 2e-04
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 37 0.011
U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated p... 37 0.011
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 37 0.011
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 37 0.011
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 37 0.011
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 37 0.011
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 34 0.10
L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 31 0.54
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 31 0.54
U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily ass... 30 1.2
U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily ass... 30 1.6
U67954-1|AAB52605.2| 826|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93391-5|CAB07686.3| 387|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical... 29 3.8
AC024817-41|AAY86306.1| 152|Caenorhabditis elegans Hypothetical... 28 5.0
>Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical
protein K11E4.4 protein.
Length = 825
Score = 87.4 bits (207), Expect = 8e-18
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Frame = +2
Query: 113 KAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYVT--EYKDA--- 277
+A + F+G NNDEL F K DIIT+TQ+ FP YVT KD
Sbjct: 191 RAKFQFEGSNNDELSFDKDDIITITQQQEGGWWEGTHEGVTGWFPCAYVTLITEKDKLQR 250
Query: 278 SGSVTTSPIRAVSEIQA---FRNVVLKDIIXSEKAHVAXMQGLVTNFLHPLEKSEMLTKD 448
S SV + + V + A +R++VLK I SEK ++ + + + L P+ S++LT
Sbjct: 251 SRSVPNATAKEVVSVGAQPDYRDLVLKSYIESEKEYMQSLLKTLQSLLIPIGASKILTAP 310
Query: 449 EFKQLTGNINEVLQIHEQFLGLLEXSATKTGPXXXVRGLFLQWAPKIKTVHQTYCGGHPK 628
E+ L GN + + LE + P V G+F+ A +++T +Y HP
Sbjct: 311 EYCTLVGNFEVIYTLKRDLFEQLEREQNEELPKMRVGGMFMNAALELRTALMSYADNHPD 370
Query: 629 AXCIL 643
A +L
Sbjct: 371 AVEVL 375
>U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle
abnormal protein 5 protein.
Length = 228
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +2
Query: 89 MSAENCLVKAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYVTEY 268
M+ E V+A++ F + + EL FK+GD+IT+ K FPSNYV Y
Sbjct: 152 MNVETKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPY 211
Query: 269 KDASGSVTTSP 301
+ +P
Sbjct: 212 NSNKSNSNVAP 222
>S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein.
Length = 228
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +2
Query: 89 MSAENCLVKAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYVTEY 268
M+ E V+A++ F + + EL FK+GD+IT+ K FPSNYV Y
Sbjct: 152 MNVETKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPY 211
Query: 269 KDASGSVTTSP 301
+ +P
Sbjct: 212 NSNKSNSNVAP 222
>U97407-8|AAN84851.1| 397|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform b protein.
Length = 397
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +2
Query: 110 VKAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYVTEYKDASGSV 289
V+A+Y F+ ++EL F GDIIT+T + FPS++VT D S
Sbjct: 216 VRALYDFEAAESNELSFVAGDIITITDESNPHWWTGRIGTQQGLFPSSFVTNQLDDLKSK 275
Query: 290 TTSPIRAVSEIQAFRN 337
T + E+ A N
Sbjct: 276 ETDSSQKAPEVVASIN 291
>U97407-7|AAB52480.2| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform a protein.
Length = 457
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +2
Query: 110 VKAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYVTEYKDASGSV 289
V+A+Y F+ ++EL F GDIIT+T + FPS++VT D S
Sbjct: 224 VRALYDFEAAESNELSFVAGDIITITDESNPHWWTGRIGTQQGLFPSSFVTNQLDDLKSK 283
Query: 290 TTSPIRAVSEIQAFRN 337
T + E+ A N
Sbjct: 284 ETDSSQKAPEVVASIN 299
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Frame = +2
Query: 332 RNVVLKDIIXSEKAHVAXMQGLVTNFLHPLEK----SEMLTKDEFKQLTGNINEVLQIHE 499
R+ VL +++ +E+ +V + +V ++ L K ++++ KD K + NI +L+ H+
Sbjct: 1810 RSYVLMELVETEQDYVKDLTSVVEGYIGNLNKMDLPADLVGKD--KIIFANIVNILEFHK 1867
Query: 500 -QFLGLLEXSATKTGPXXXVRGLFLQWAPKIKTVHQTYCGGHPKAXCIL 643
FL +E + F+++ ++ T++ TYC PK+ +L
Sbjct: 1868 TNFLKEIEKCSEN---YEAAGAAFVKYERRLHTLYVTYCQNKPKSDYLL 1913
>U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated
protein 73, isoform d protein.
Length = 552
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Frame = +2
Query: 332 RNVVLKDIIXSEKAHVAXMQGLVTNFLHPLEK----SEMLTKDEFKQLTGNINEVLQIHE 499
R+ VL +++ +E+ +V + +V ++ L K ++++ KD K + NI +L+ H+
Sbjct: 164 RSYVLMELVETEQDYVKDLTSVVEGYIGNLNKMDLPADLVGKD--KIIFANIVNILEFHK 221
Query: 500 -QFLGLLEXSATKTGPXXXVRGLFLQWAPKIKTVHQTYCGGHPKAXCIL 643
FL +E + F+++ ++ T++ TYC PK+ +L
Sbjct: 222 TNFLKEIEKCSEN---YEAAGAAFVKYERRLHTLYVTYCQNKPKSDYLL 267
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Frame = +2
Query: 332 RNVVLKDIIXSEKAHVAXMQGLVTNFLHPLEK----SEMLTKDEFKQLTGNINEVLQIHE 499
R+ VL +++ +E+ +V + +V ++ L K ++++ KD K + NI +L+ H+
Sbjct: 245 RSYVLMELVETEQDYVKDLTSVVEGYIGNLNKMDLPADLVGKD--KIIFANIVNILEFHK 302
Query: 500 -QFLGLLEXSATKTGPXXXVRGLFLQWAPKIKTVHQTYCGGHPKAXCIL 643
FL +E + F+++ ++ T++ TYC PK+ +L
Sbjct: 303 TNFLKEIEKCSEN---YEAAGAAFVKYERRLHTLYVTYCQNKPKSDYLL 348
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Frame = +2
Query: 332 RNVVLKDIIXSEKAHVAXMQGLVTNFLHPLEK----SEMLTKDEFKQLTGNINEVLQIHE 499
R+ VL +++ +E+ +V + +V ++ L K ++++ KD K + NI +L+ H+
Sbjct: 250 RSYVLMELVETEQDYVKDLTSVVEGYIGNLNKMDLPADLVGKD--KIIFANIVNILEFHK 307
Query: 500 -QFLGLLEXSATKTGPXXXVRGLFLQWAPKIKTVHQTYCGGHPKAXCIL 643
FL +E + F+++ ++ T++ TYC PK+ +L
Sbjct: 308 TNFLKEIEKCSEN---YEAAGAAFVKYERRLHTLYVTYCQNKPKSDYLL 353
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Frame = +2
Query: 332 RNVVLKDIIXSEKAHVAXMQGLVTNFLHPLEK----SEMLTKDEFKQLTGNINEVLQIHE 499
R+ VL +++ +E+ +V + +V ++ L K ++++ KD K + NI +L+ H+
Sbjct: 1810 RSYVLMELVETEQDYVKDLTSVVEGYIGNLNKMDLPADLVGKD--KIIFANIVNILEFHK 1867
Query: 500 -QFLGLLEXSATKTGPXXXVRGLFLQWAPKIKTVHQTYCGGHPKAXCIL 643
FL +E + F+++ ++ T++ TYC PK+ +L
Sbjct: 1868 TNFLKEIEKCSEN---YEAAGAAFVKYERRLHTLYVTYCQNKPKSDYLL 1913
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Frame = +2
Query: 332 RNVVLKDIIXSEKAHVAXMQGLVTNFLHPLEK----SEMLTKDEFKQLTGNINEVLQIHE 499
R+ VL +++ +E+ +V + +V ++ L K ++++ KD K + NI +L+ H+
Sbjct: 1810 RSYVLMELVETEQDYVKDLTSVVEGYIGNLNKMDLPADLVGKD--KIIFANIVNILEFHK 1867
Query: 500 -QFLGLLEXSATKTGPXXXVRGLFLQWAPKIKTVHQTYCGGHPKAXCIL 643
FL +E + F+++ ++ T++ TYC PK+ +L
Sbjct: 1868 TNFLKEIEKCSEN---YEAAGAAFVKYERRLHTLYVTYCQNKPKSDYLL 1913
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 116 AIYSFKGKNNDELCFKKGDIITVTQK---XXXXXXXXXXXXXXXXFPSNYVTE 265
A+Y ++ DEL FK GD+I VT K FPSNYV +
Sbjct: 1044 AVYDYEASQPDELGFKTGDVIIVTDKSEAEWWSGHREQDPSKSGLFPSNYVQQ 1096
Score = 31.1 bits (67), Expect = 0.71
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 113 KAIYSFKGKNNDELCFKKGDIITVTQ 190
+A+++F+ ++ DEL F+ GD+I V Q
Sbjct: 679 RALFAFEARSEDELSFEPGDVIIVFQ 704
>L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical
protein F42H10.3 protein.
Length = 335
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +2
Query: 110 VKAIYSFKGKNNDELCFKKGDIITVTQK--XXXXXXXXXXXXXXXXFPSNYVTEYKDASG 283
VKAIY + + DE+ F +GDII +K P+NYV +K +G
Sbjct: 271 VKAIYDYAAADKDEISFLEGDIIVNCEKIDDGWMTGTVQRTLQWGMLPANYVQPHKLPTG 330
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical protein
F29D10.4 protein.
Length = 1100
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 101 NCLVKAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYVTE 265
N +V A+Y ++ ++ DEL F+ G I + K FP NYV E
Sbjct: 1046 NPVVIAVYPYEAQDVDELSFEAGAEIELMNKDASGWWQGKVNNRVGLFPGNYVKE 1100
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 101 NCLVKAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYVTE 265
N +V A+Y ++ ++ DEL F+ G I + K FP NYV E
Sbjct: 982 NPVVIAVYPYEAQDVDELSFEAGAEIELMNKDASGWWQGKVNNRVGLFPGNYVKE 1036
>U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform a protein.
Length = 395
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 107 LVKAIYSFKGKNNDELCFKKG---DIITVTQKXXXXXXXXXXXXXXXXFPSNYVTEYKDA 277
+V A+YSF +++EL FKKG +I+ + P NY+ D+
Sbjct: 215 VVVALYSFDASSSEELSFKKGERLEIVDHPEHDPDWWMARNASGTTGLVPRNYIEVVNDS 274
Query: 278 SGS 286
S S
Sbjct: 275 SSS 277
>U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform b protein.
Length = 286
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 86 KMSAENCLVKAIYSFKGKNNDELCFKKGDIITV 184
+ S E +V A+YSF +++EL FKKG+ + +
Sbjct: 98 RSSFEIQVVVALYSFDASSSEELSFKKGERLEI 130
>U67954-1|AAB52605.2| 826|Caenorhabditis elegans Hypothetical
protein F41D9.1 protein.
Length = 826
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +2
Query: 113 KAIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYVTEYKDASGSVT 292
+A+ F + +EL F+K DI+T+ + FP+ +V + S T
Sbjct: 530 RALLDFAREEENELGFRKNDIVTIISEKDEHCWVGEVNGLRGWFPAKFVEVVDERGKSYT 589
Query: 293 TSPIRAVS 316
AVS
Sbjct: 590 IYGDEAVS 597
>Z93391-5|CAB07686.3| 387|Caenorhabditis elegans Hypothetical
protein W04G5.6 protein.
Length = 387
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +2
Query: 86 KMSAENCLVKAIYSFKGKNNDELCFKK 166
K+S E CL++ I + + + N++ C+KK
Sbjct: 359 KLSEEVCLIETIETIESEANEQRCYKK 385
>AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical
protein Y45F10D.13a protein.
Length = 473
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 110 VKAIYSFKGKNNDELCFKKGDIIT 181
++AIY F +++ EL K+G+IIT
Sbjct: 218 MRAIYPFTARSDTELSLKRGEIIT 241
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 116 AIYSFKGKNNDELCFKKGDIITVTQKXXXXXXXXXXXXXXXXFPSNYV 259
A+Y F+ ++ EL +GDII + ++ FP++YV
Sbjct: 158 AVYKFEPRSARELPLNRGDIIRIIREVDGYWMEGERNGRSGIFPTSYV 205
>AC024817-41|AAY86306.1| 152|Caenorhabditis elegans Hypothetical
protein Y54G2A.50 protein.
Length = 152
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 47 LNTKNYKWC*NFGKMSAENCLVKAIYSFKGKNND 148
LN K WC N K S + C + I+ F+ + D
Sbjct: 94 LNDKKRAWCSNKTKNSIKQCFIVFIFGFERRFGD 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,450,730
Number of Sequences: 27780
Number of extensions: 275695
Number of successful extensions: 587
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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