Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_O03
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 262 2e-70
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 249 1e-66
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 194 5e-50
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 8e-41
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 93 2e-19
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 90 1e-18
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 84 8e-17
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 80 1e-15
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 77 1e-14
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 52 3e-07
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 39 0.003
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 36 0.022
SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085) 33 0.20
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 31 0.62
SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_19689| Best HMM Match : VWA (HMM E-Value=0.0035) 30 1.4
SB_3760| Best HMM Match : SVA (HMM E-Value=0.19) 30 1.4
SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_26973| Best HMM Match : DUF471 (HMM E-Value=1.1) 28 5.8
SB_24028| Best HMM Match : DNA_photolyase (HMM E-Value=1.3e-39) 28 5.8
SB_30603| Best HMM Match : PKD_channel (HMM E-Value=1.2e-15) 28 7.6
SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 7.6
SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5) 28 7.6
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 262 bits (641), Expect = 2e-70
Identities = 115/162 (70%), Positives = 134/162 (82%)
Frame = +3
Query: 72 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQ 251
PRVFFD+T+ + G+IV+ELRSDV P T ENFR LCT EKGFGYKGS FHR+IP FM Q
Sbjct: 137 PRVFFDITIGERSAGRIVMELRSDVVPMTAENFRCLCTHEKGFGYKGSSFHRIIPQFMCQ 196
Query: 252 GGDFTNHNGTGGKSIYGNKFEXXNFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLD 431
GGDFT HNGTGGKSIYG KFE NF LKHTG GVLSMAN+G +TNGSQFF+TT KT WLD
Sbjct: 197 GGDFTKHNGTGGKSIYGAKFEDENFVLKHTGAGVLSMANSGPNTNGSQFFLTTEKTDWLD 256
Query: 432 GRHVVFGNVVEGMEVVKQIETFGSQSGKTSXRIVIKDCGXIA 557
G+HVVFGNV+EG +VV+++E GSQSGK S ++VI DCG ++
Sbjct: 257 GKHVVFGNVIEGFDVVRKMEAVGSQSGKASKKVVIDDCGELS 298
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 249 bits (610), Expect = 1e-66
Identities = 112/158 (70%), Positives = 128/158 (81%)
Frame = +3
Query: 81 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 260
+FD+ + AP G+IV+ELR DV PKT ENFRALCTGEKGFGYKGS FHRVIP FM QGGD
Sbjct: 6 YFDIEIGGAPAGRIVMELRDDVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQGGD 65
Query: 261 FTNHNGTGGKSIYGNKFEXXNFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRH 440
FT +GTGGKSIYG KF NF LKHTGPG+LSMANAG TNGSQFF+ T KTSWLDG+H
Sbjct: 66 FTRGDGTGGKSIYGAKFADENFNLKHTGPGILSMANAGPGTNGSQFFLCTAKTSWLDGKH 125
Query: 441 VVFGNVVEGMEVVKQIETFGSQSGKTSXRIVIKDCGXI 554
VVFG+V +GM+VVK+IE GS SGKTS ++VI D +
Sbjct: 126 VVFGSVKDGMDVVKKIEKVGSDSGKTSKKVVIADSASV 163
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 194 bits (473), Expect = 5e-50
Identities = 87/139 (62%), Positives = 106/139 (76%)
Frame = +3
Query: 75 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 254
+V+ DV++ P G++++ L D PKT NF AL E+GFGYK SIFHRVI NFM+QG
Sbjct: 27 KVWMDVSIGGQPAGRVILGLFGDTAPKTVANFVALADKEQGFGYKDSIFHRVIKNFMIQG 86
Query: 255 GDFTNHNGTGGKSIYGNKFEXXNFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDG 434
GDFTN +GTGG SIYG F+ NF LKH GPG L MANAG +TNGSQF+ITT+KTSWLDG
Sbjct: 87 GDFTNKDGTGGYSIYGKYFDDENFNLKHYGPGWLCMANAGKNTNGSQFYITTIKTSWLDG 146
Query: 435 RHVVFGNVVEGMEVVKQIE 491
H FG V+EGM+VV++IE
Sbjct: 147 SHTCFGKVLEGMDVVRRIE 165
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 163 bits (397), Expect = 8e-41
Identities = 88/152 (57%), Positives = 103/152 (67%), Gaps = 18/152 (11%)
Frame = +3
Query: 75 RVFFDVTVDDAPLGKI------VIELRSDVTPKTCE-----NFRAL-----CT--GEKGF 200
+VFFD+T+ G+I +I+ + + E NFR CT +KGF
Sbjct: 28 KVFFDITIGGEKAGRIEIGLFVIIKTYYLLATRLVESLIGTNFRYFDTYYCCTIESQKGF 87
Query: 201 GYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEXXNFTLKHTGPGVLSMANAGAD 380
GYK SIFHRVI +FM+QGGDFT +GTGGKSIYG KF NF L+H G G LSMANAG D
Sbjct: 88 GYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFKLQHYGAGWLSMANAGKD 147
Query: 381 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 476
TNGSQFFITTVKT WLDGRHVVFG V++GMEV
Sbjct: 148 TNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 92.7 bits (220), Expect = 2e-19
Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = +3
Query: 273 NGTGGKSIYGNKFEXX-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 449
+GTGG+SI+G +FE + L+H P +SMANAG +TNGSQFFIT V T WLD +H VF
Sbjct: 2 DGTGGESIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVF 61
Query: 450 GNVVEGMEVVKQI 488
G VV+GM+V +QI
Sbjct: 62 GRVVKGMDVAQQI 74
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +3
Query: 333 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 512
+H PG+LSMAN+G +TNGSQFFITTV T LDGRHVVFG V++GM+VV+++E
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEATPVDDS 247
Query: 513 KTSXRIVIKDCGXIA 557
+I++CG +A
Sbjct: 248 SPKSPCIIEECGELA 262
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/65 (60%), Positives = 48/65 (73%)
Frame = +3
Query: 360 MANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSXRIVIK 539
MANAG DTNGSQFFITTVKTSWLDG+HVVFG V+EGM+VV+++E + +I
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLENVNVKGSTPVKTCMID 60
Query: 540 DCGXI 554
D G +
Sbjct: 61 DSGTL 65
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 84.2 bits (199), Expect = 8e-17
Identities = 37/93 (39%), Positives = 56/93 (60%)
Frame = +3
Query: 276 GTGGKSIYGNKFEXXNFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 455
G GG+S+YG FE +F++ H GV+ MAN G TNGSQF+IT W+D ++V FG
Sbjct: 46 GIGGESVYGPLFEDEDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQ 105
Query: 456 VVEGMEVVKQIETFGSQSGKTSXRIVIKDCGXI 554
V+EG+ V+ +E + + + + DCG +
Sbjct: 106 VIEGLNVLDVLEGQETFNERPKVECRVADCGVL 138
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 80.2 bits (189), Expect = 1e-15
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Frame = +3
Query: 273 NGTGGKSIYGNKFEXXNFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 452
NGTGG+SIYG F F KH P +LSMAN G +TNGSQFFI HVVFG
Sbjct: 25 NGTGGESIYGGTFGDECFEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFG 74
Query: 453 NVVEGMEVVKQIETF-GSQSGKTSXRIVIKDCGXI 554
+V++G E+V+QIE+ ++ + + + + +CG +
Sbjct: 75 HVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 109
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = +3
Query: 351 VLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 488
+LSMANAG TNGSQFF+ T KTSWLDG+HVVFG+V +GM+VVK++
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 65.7 bits (153), Expect = 3e-11
Identities = 58/155 (37%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Frame = +3
Query: 42 TLLIPGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIF 221
++L+PG + LP V + + LG+I IEL +D P + NF A + G+ Y G+ F
Sbjct: 11 SILLPGSL-LPPENPKVLLTTS-LGEIEIELDADKAPISTANFLAYV--DSGY-YAGTQF 65
Query: 222 HRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEXXNFTLKHTGPGVLSMANAGA-DTNGSQF 398
HRVIP FM+QGG F + + + K E N H G L+MA D+ SQF
Sbjct: 66 HRVIPGFMVQGGGF-DADMQQKDTQAPIKNEADNGL--HNVRGTLAMARTQVRDSATSQF 122
Query: 399 FITTVKTSWLDG-----RHVVFGNVVEGMEVVKQI 488
FI ++LD + VFG VV+GM+VV +I
Sbjct: 123 FINHKDNAFLDHGSRDFGYAVFGKVVKGMDVVDKI 157
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 8/46 (17%)
Frame = +3
Query: 114 GKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSIFHR 227
G+++ EL +D PKT ENFRALCTGEKG G YKG FHR
Sbjct: 2 GRVLFELFADKVPKTAENFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 336 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 452
H G +SMAN G ++NGSQFFI K LD ++ +FG
Sbjct: 301 HNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFG 339
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = +3
Query: 111 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 290
+G I IEL TPK C NF LC +G+ Y +IFHR++ +GG+ N G G
Sbjct: 12 VGDIDIELWGKETPKACRNFIQLCL--EGY-YDNTIFHRIV-----KGGE--NIYGQSGF 61
Query: 291 SIYGN 305
+ GN
Sbjct: 62 KVTGN 66
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/40 (35%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 438 HVVFGNVVEGMEVVKQIETF-GSQSGKTSXRIVIKDCGXI 554
HVVFG+V++G E+V+QIE+ ++ + + + + +CG +
Sbjct: 3 HVVFGHVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 42
>SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085)
Length = 512
Score = 33.1 bits (72), Expect = 0.20
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = -1
Query: 548 TTVFDNDSXRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELGTISISTG 369
T V +N + PR A +GL D F+ K+ MS I+PGG D +EE T S G
Sbjct: 431 TKVPENVQPKPKPRRAGEGLPHSDFKSGFSY--KEYMSGIRPGGPDMEEEEKATPQ-SNG 487
Query: 368 ISHGEDARS 342
+ E A+S
Sbjct: 488 DASDEKAQS 496
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = -2
Query: 478 TTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 341
TT PST P T PS+ E +T WEP P PGP
Sbjct: 34 TTGEPSTWEPMTGA-PSTWEPMTGAPSTWEPWTDGPGPYPTDGPGP 78
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 451 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 341
P TT PS+ E +T WEP+ AP+ T GP
Sbjct: 32 PFTTGEPSTWEPMTGAPSTWEPMTGAPSTWEPWTDGP 68
>SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -2
Query: 481 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 341
L+ + + FP TT P + + T + EPL+ P +R P P
Sbjct: 13 LSATQLTAAFPTTTTTPVTTQTTTTDVSRTEPLIELPTAQEKRKPCP 59
>SB_19689| Best HMM Match : VWA (HMM E-Value=0.0035)
Length = 885
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 105 APLGKIVIELRSDVTPKTCENFRALCTG 188
AP I+I L S V+PKT E+ R LC G
Sbjct: 569 APKIDIIIALDSGVSPKTFEDERQLCAG 596
>SB_3760| Best HMM Match : SVA (HMM E-Value=0.19)
Length = 259
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Frame = -2
Query: 454 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 341
FP+ + LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPSLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1110
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = -2
Query: 454 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 341
FP+ LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPPLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = -2
Query: 499 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKX 320
P+ TTS PST+ P+T ++ T N AP+ + RT + LR
Sbjct: 87 PRTGSTTTTSAPSTSTPRTGSTTTTSAPSTSTTSN--STTRAPSTSTPRTGSTITLRTST 144
Query: 319 S 317
+
Sbjct: 145 T 145
>SB_26973| Best HMM Match : DUF471 (HMM E-Value=1.1)
Length = 674
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 190 RKASVTRAPFSIVSSPISCCKEGTSPTITALGESP 294
+K R S V SC +EG SPT T+ G++P
Sbjct: 276 KKPFSNREAHSCVELCRSCVREGCSPTPTSRGDAP 310
>SB_24028| Best HMM Match : DNA_photolyase (HMM E-Value=1.3e-39)
Length = 432
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 85 STSLLTMPHWEKLLLS*EVTSLPRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGTS 264
S +L T E LS V+ + + T+V C L ++ +S+ +SC + S
Sbjct: 346 SKALSTTVSCELKALSTTVSCELKALSTTVSCQLKALSTTVSCELKALSTTVSCQSKALS 405
Query: 265 PTITALGESPST 300
T++ ++ ST
Sbjct: 406 TTVSCQSKALST 417
>SB_30603| Best HMM Match : PKD_channel (HMM E-Value=1.2e-15)
Length = 1029
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 67 DILPGISNVSKFTKP 23
D LPG SNV+K+TKP
Sbjct: 706 DYLPGWSNVTKYTKP 720
>SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2014
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -2
Query: 184 VHRARKFSHVLGV--TSLLSSITIFPSGASSTVTSKNTRGRDIL 59
+ + KF+H+ G+ TS T+F +T T TR RD++
Sbjct: 168 IQQLHKFTHIHGMLSTSSRGRYTLFRGQYDTTATQIYTRSRDVI 211
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = -2
Query: 511 PDWLPKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 341
P P + TT+ P TT P+TT P + T + P + P +T P
Sbjct: 1767 PPHSPPTTTTTTTTTPETTAPRTT-TPETTTPETTTPRTTTPETTKPRTTTPKTTTP 1822
>SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5)
Length = 128
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 175 PCALARKASVTRAPFSIVSSPISCCKE-GTSPTITA-LGESPST 300
PCALA SV+ P S VSS + G S TI+A SP T
Sbjct: 48 PCALATAPSVSEVPASTVSSSSPLRRSPGPSGTISASTSGSPRT 91
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +3
Query: 255 GDFTNHNGTGGKSIYGNKFEXXN-FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLD 431
G T GTGG S N + T PGV AN G S + ++ TSW +
Sbjct: 313 GAGTGGPGTGGPSGSSNPPTTGTPASASPTAPGVKGGANGGDCFRDSCYIFSSEGTSWTE 372
Query: 432 GR 437
R
Sbjct: 373 NR 374
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,977,479
Number of Sequences: 59808
Number of extensions: 469056
Number of successful extensions: 1416
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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