Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_O03
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   4.5  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   6.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   6.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.0  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +3

Query: 195 GFGYKGSIFHRVIPN 239
           GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +3

Query: 195 GFGYKGSIFHRVIPN 239
           GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +3

Query: 195 GFGYKGSIFHRVIPN 239
           GFGY+ ++ ++V+P+
Sbjct: 15  GFGYESNVKYQVVPS 29


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 335 LKGEIXVFKLIAVDGLSPSAVMVGE 261
           L G +  FK++ ++ L+  +V +GE
Sbjct: 55  LAGGLKSFKILPIEPLAVDSVKIGE 79


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
          protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 56 GY*QCKQVYKTTTMTMR 6
          GY Q KQ+  +TTM+++
Sbjct: 3  GYYQMKQITNSTTMSVK 19


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -2

Query: 523 LEVFPDWLPKVSICLTTSMPSTTFPKTTCLPSSQ 422
           L V+P++   V +C   S   ++  KT C   +Q
Sbjct: 643 LNVYPEFQENVQLCSEISESYSSNNKTLCKCDAQ 676


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,525
Number of Sequences: 438
Number of extensions: 3884
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)