Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_O01
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    24   0.67 
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    24   0.67 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   2.7  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   3.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   6.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.3  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   6.3  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.3  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   8.3  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    21   8.3  

>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 7/39 (17%)
 Frame = +1

Query: 115 RRDAPDFFKDIEH-----HTKEFHKT--LEQQFNSLTKS 210
           RR AP  F+DI+H     + +E  +T  L + F SL KS
Sbjct: 84  RRKAPQSFEDIQHQRVMANVRERQRTQSLNEAFASLRKS 122


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 296 RAALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 439
           R  LGD + K   +  Q+ + +ER  +E  + +P V   + AL E ++
Sbjct: 27  RDVLGDIHAKPTYSDLQNLKYLERCIKESLRLYPSVHLISRALGEDVR 74


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 218 ASFDLVSELNCCSKVLWNSLV 156
           A  D  SE++C S+ +W+ L+
Sbjct: 102 ALLDTGSEVSCISEEVWSKLI 122


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 438 CSFSRRAVAFFSTSGWALRSSSAVRSMFCLDCSK 337
           C    ++ A  ST    LR+ S  +   C+DC+K
Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNK 285


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 422 LREKLQAAVQNTVQESHKLAXKVSSNV 502
           +++KLQ  +  T+QE+H    K+S NV
Sbjct: 301 VQKKLQKEIDLTLQENH---GKISYNV 324


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 227 KSCASFDLVSELNCCSKVLWNS 162
           KS A+FD V+  +    +LW S
Sbjct: 418 KSLAAFDFVARNSDTPIILWTS 439


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -2

Query: 143 SLKKSGASRRTIAALGQSDAGEENYELGGHDVLSR 39
           +LK    + +T+ A+G  + G E Y     D   R
Sbjct: 88  ALKVKNPNLKTLIAIGGWNEGSETYSQVAADAAKR 122


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +2

Query: 305 LGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKL 436
           LGD   K      Q  + +ER  +E+ + +P V   +  L E L
Sbjct: 346 LGDIKKKPTYQDLQEMKYLERCVKEVLRLYPSVHFISRKLGEDL 389


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 261 AATAQRLRQESPGQRSETRTARPXRL 338
           A+TA      SP Q  E  + RP  L
Sbjct: 207 ASTASSASNYSPSQSPEPESVRPLSL 232


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +2

Query: 305 LGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKL 436
           LGD   K      Q  + +ER  +E+ + +P V   +  L E L
Sbjct: 346 LGDIKKKPTYQDLQEMKYLERCVKEVLRLYPSVHFISRKLGEDL 389


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 405 STSGWALRSSSAVRSMFCLDCSK 337
           ST    LR+ S  +   C+DC+K
Sbjct: 7   STLKTHLRTHSGEKPYRCIDCNK 29


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +2

Query: 296 RAALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKL 436
           R  LGD + K      Q+ + +ER  +E  + +P V   +  L + L
Sbjct: 27  REVLGDLSKKPSYNDLQNLKYLERCIKETLRLYPSVHFISRTLGQDL 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.128    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,692
Number of Sequences: 336
Number of extensions: 1419
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)