Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_O01
(504 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 32 0.23
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 32 0.30
04_01_0180 + 2034021-2034023,2034741-2035088 31 0.69
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 31 0.69
01_07_0084 + 40976976-40977164,40978174-40978201,40978445-409785... 29 2.8
10_08_0745 - 20260136-20260236,20260890-20260937,20261025-202611... 28 3.7
12_02_1167 + 26647293-26648356,26648493-26648577,26649129-266491... 28 4.9
04_03_0845 - 20245836-20246046,20246137-20246219,20246330-202464... 28 4.9
11_01_0727 - 6010537-6010548,6011029-6011606,6011709-6011774,601... 27 6.5
09_04_0395 + 17266560-17266593,17266656-17267199,17267297-172677... 27 6.5
06_01_0008 + 141405-142421 27 6.5
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401 27 6.5
03_04_0034 + 16679624-16679940,16679980-16680199,16680319-166806... 27 6.5
01_07_0376 - 43156672-43156902,43157505-43157741,43157934-431582... 27 6.5
10_01_0262 + 2752044-2752079,2752880-2753167,2753198-2753551 27 8.6
05_06_0186 - 26207298-26208548,26208743-26208853,26209286-262095... 27 8.6
02_04_0315 - 21969416-21970756 27 8.6
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 32.3 bits (70), Expect = 0.23
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -2
Query: 371 PCARCSASTVPKPXWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 213
P R SA T+ WP L A+ +R L AL+CC + S PS L++C S
Sbjct: 99 PGLRASAPTL---RWPFPRLLDAIAFRPLPCALACCGS-SAPSVVRHLRACGS 147
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 31.9 bits (69), Expect = 0.30
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 299 AALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 445
AA+ DA G+ +A+E ++ E+L A+PDVE L E L+ A
Sbjct: 514 AAIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEA 562
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 30.7 bits (66), Expect = 0.69
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +2
Query: 332 EALEQSRQNIERTAEELRKAHPDVEKNATALREK---LQAAVQN 454
EALE+ QN+ R EE +K H +++K L K L AA +N
Sbjct: 52 EALERQVQNLTRYKEEKQKQHANLQKEFAELERKYRDLDAAHRN 95
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 30.7 bits (66), Expect = 0.69
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 311 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKV 490
DA G+ EA+E + E+L A+PDV+ L E L+ A + +++ L +
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSLENLL 696
Query: 491 SSN 499
+N
Sbjct: 697 ETN 699
>01_07_0084 + 40976976-40977164,40978174-40978201,40978445-40978575,
40978941-40979434,40979516-40979609,40979686-40979779,
40980342-40980444,40980550-40980601,40980716-40980756,
40980881-40980960,40981490-40981936,40982378-40982554,
40983205-40983803,40983886-40985040
Length = 1227
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 228 QQGLEGRLRVRAATAQRLRQESPGQRSETRTARPXRLWN 344
+Q G+ TA+ RQ S GQ+S + A P R W+
Sbjct: 1132 RQWSSGQQSYNTVTAEPSRQWSSGQQSYSNPAEPSRQWS 1170
>10_08_0745 -
20260136-20260236,20260890-20260937,20261025-20261165,
20261358-20261603,20261744-20262583,20263253-20263286
Length = 469
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -2
Query: 233 LLKSCASFDLVSELNCCSKVLWNSLVWCSMSLKKSGASRRTIAALGQSDAG 81
LL +C+ D + E CC V ++V ++ + GA+ +++ SDAG
Sbjct: 205 LLDACSDVDPLKE--CCRPVCQPAIVEAAVHISSGGANMFGSSSISGSDAG 253
>12_02_1167 +
26647293-26648356,26648493-26648577,26649129-26649191,
26649381-26649443,26649987-26650070,26650229-26650783
Length = 637
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 323 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKL 478
KA LE+ ++E E A+ ++++ L+EK + V+N + H+L
Sbjct: 391 KANGNLEKQLLSLEEKYENATHANGELKEELLFLKEKFVSVVENNTRLEHQL 442
>04_03_0845 -
20245836-20246046,20246137-20246219,20246330-20246470,
20246561-20247421
Length = 431
Score = 27.9 bits (59), Expect = 4.9
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 226 SPVRPLTW*A-S*TVVLKSYGTPWCGVRCP*RSRERRVAPSLPWARAMQAKRTTNLAAMM 50
SP+ P T A + T VL S+ P R S RVA + W R + AKR + A++
Sbjct: 77 SPIAPWTARADAVTRVLASHPGPVALFRLSRTSFRGRVAAAEAWFRELAAKRAREV-ALL 135
Query: 49 CCRE 38
C E
Sbjct: 136 CAPE 139
>11_01_0727 -
6010537-6010548,6011029-6011606,6011709-6011774,
6011867-6011964,6013238-6013608
Length = 374
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +3
Query: 24 PPHSVSRQHIMAAKFVVLFACIALAQGSDGATR 122
PPH VSR + AA F A A A+G D R
Sbjct: 41 PPHQVSRPWLPAAGFRSSAAASAAARGDDYGRR 73
>09_04_0395 +
17266560-17266593,17266656-17267199,17267297-17267766,
17267855-17267990,17268097-17268168,17268228-17268276,
17268292-17268360,17268609-17268680,17268769-17268786
Length = 487
Score = 27.5 bits (58), Expect = 6.5
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = -3
Query: 169 GTPWCGVRCP*RSRERRVAPSLPWARA--MQAKRTTNLAAMMCCRETECGGDANXDC 5
G W GV C R V+ +L + + NL A+ E +C G N DC
Sbjct: 376 GNSWTGVTCTQEPLARVVSLNLTNFKVGGSISDGIANLTAISSILEKDCSGKVNIDC 432
>06_01_0008 + 141405-142421
Length = 338
Score = 27.5 bits (58), Expect = 6.5
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -2
Query: 383 GAPRPCARCSASTVPKPXWPCR---SRLR-ALPWRLLAKALSCCSTDSEPSFQ 237
G+ RP A SAS P P P R R R +LPW L A A + S P+ Q
Sbjct: 259 GSHRPAAPASASASPSPAPPPRLAERRFRISLPWPLRA-AFGGQAESSNPTNQ 310
>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
Length = 500
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 308 GDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 439
GD G+ A+ +R E A LR+A ++ A ALR +++
Sbjct: 47 GDGEGEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVE 90
>03_04_0034 +
16679624-16679940,16679980-16680199,16680319-16680624,
16680703-16681044,16681066-16681257,16681533-16681684,
16681803-16681974,16682017-16682338,16682414-16682862
Length = 823
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 299 AALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 457
AA+G G A A SR ++ R +L H D ++K + +NT
Sbjct: 141 AAVG-GGGAAVSARPASRASVRRNVSDLAAEHSDANDGIPVRKDKANWSARNT 192
>01_07_0376 -
43156672-43156902,43157505-43157741,43157934-43158295,
43158370-43158670
Length = 376
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 293 SRAALGDANGKAXEALEQSRQN---IERTAEELRKAHPD 400
SRA LG +A++ S ++ IE EELR+ HPD
Sbjct: 164 SRAVLGRLERGVIKAVQLSAEHNASIESVREELRQFHPD 202
>10_01_0262 + 2752044-2752079,2752880-2753167,2753198-2753551
Length = 225
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = -2
Query: 170 WNSLVWCSMSLKKSGASRRTIAALGQSDAGEENYELGGHD 51
W VWC+ L+ G+ RT S + GG D
Sbjct: 68 WTLCVWCADPLRDDGSQPRTGTGQQSSSSSLSGSRFGGGD 107
>05_06_0186 -
26207298-26208548,26208743-26208853,26209286-26209507,
26209623-26209658
Length = 539
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 90 ALAQGSDGATRRS-RLLQGHRTPHQGVP 170
A +QG A RR RLL G+RTPH P
Sbjct: 12 AKSQGPTTARRRPLRLLPGNRTPHPPPP 39
>02_04_0315 - 21969416-21970756
Length = 446
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 311 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKL 478
D NG ALE++ + + E L A + K A+ EK ++A++ QE+ L
Sbjct: 246 DENGSLRRALERAVEEVNAANESLELATGENSKLQDAVAEK-ESAMEALRQENESL 300
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.128 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,970,293
Number of Sequences: 37544
Number of extensions: 198299
Number of successful extensions: 890
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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