Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_O01
(504 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_17610| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 29 1.6
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 29 2.9
SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8) 28 3.8
SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33) 28 3.8
SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 3.8
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 28 5.0
SB_43708| Best HMM Match : TPR_2 (HMM E-Value=0.011) 28 5.0
SB_28865| Best HMM Match : DUF1565 (HMM E-Value=1.3) 28 5.0
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 27 6.6
SB_13066| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0) 27 8.8
SB_39744| Best HMM Match : Sybindin (HMM E-Value=3.6) 27 8.8
SB_4260| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 31.9 bits (69), Expect = 0.31
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -2
Query: 383 GAPRPCARCSASTVPKPXWPCRSRLRALPWRLLAKALSCCSTDSEPSFQA 234
G PC+RC + P P R + WR LA ALS +T + A
Sbjct: 95 GQNNPCSRCGLLSCPTTTSP-EKRRKTPSWRTLAPALSPSATQPAACYDA 143
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 30.7 bits (66), Expect = 0.71
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 139 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLN 276
+ IEH + K +QQF+S K+ D D S K+ + ++ L+
Sbjct: 468 RSIEHKIQRLEKKFDQQFSSTEKNMDKNDSSLPKKEIFQQIVTDLS 513
>SB_17610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 30.7 bits (66), Expect = 0.71
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 371 PCARCSASTVPKPXWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALL 228
P +RC + P P + R + L WR LA ALS +T + A L
Sbjct: 54 PWSRCGLLSCPTTTSPAKRR-KTLSWRTLAPALSPSATQPDACCDAAL 100
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 338 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXK 487
L Q R+N E + L+ +EK +LR++L V Q + +L K
Sbjct: 103 LTQERENYETREKTLQSKITSIEKENNSLRDELNKTVSELTQTTAELQDK 152
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +2
Query: 317 NGKAXEAL---EQSRQNIERTAEELRKAHPDVEK 409
NGKA E + E+ IE E++RKA+ ++EK
Sbjct: 1930 NGKATEMVKKNEEKNNEIEEMREKMRKANEEIEK 1963
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 332 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSS 496
E+ + ++ IE E++ +ATA +E+L++AV+ + KL K+S+
Sbjct: 938 ESESKLQERIESLREKITGLELAAINDATASKEELESAVEEKAKAETKLKVKISA 992
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 311 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLA 481
D K + +E+ +Q+ +E VE+N +EK AVQN + E ++A
Sbjct: 552 DKQEKENKQVEEEQQDEPVKQDEQENRDEPVEQNEQEKQEKALDAVQNIINEELRMA 608
>SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8)
Length = 251
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 362 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 466
+RT EE+R+ D+++ +RE + + +N Q+
Sbjct: 172 KRTVEEIRRLDSDIQQRVVKIREDIATSGENIQQQ 206
>SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33)
Length = 958
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -2
Query: 317 SRLRALPWRLLAKALSCCSTDSEPSFQALLKSCASFDLVSELNCCSKVLWNSL 159
S L + W L + + C + D PS L +C D +SE + C K LW +L
Sbjct: 420 SALSLITWNELERGI-CGNPDVSPS--VLKSACKYGDDLSESSECIKFLWAAL 469
>SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 119 RRTIAALGQSDAGEENYELGGHDVLSR 39
R+ +AALG + G Y +GGHD R
Sbjct: 355 RKEVAALGVASFGNYIYAIGGHDNTGR 381
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 317 NGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 466
N + EAL+ + + +E+ + +K+ TAL+E+L + VQ +E
Sbjct: 642 NNELNEALQAAETKNKAMEKEIDALKQNKDKDVTALKEELTSEVQKYKEE 691
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 353 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLA 481
++I+ EL K + D+E+ T LRE L++ V++ + +LA
Sbjct: 1407 ESIQAEKSELGKRNWDLEEIVTNLREDLESLVKHRAELEEQLA 1449
>SB_43708| Best HMM Match : TPR_2 (HMM E-Value=0.011)
Length = 270
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 290 VSRAALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 457
V+ ALGD + EAL + + T E LR H + ALR+ + A++NT
Sbjct: 5 VTHEALGDTH----EALRDTHDALRDTHEALRDTHEALRDTHEALRD-IHEALRNT 55
>SB_28865| Best HMM Match : DUF1565 (HMM E-Value=1.3)
Length = 367
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2
Query: 122 SRRTIAALGQSDAGEENYELGGHDVLSRD*VR 27
S RT + G + AG+E YEL DV SRD VR
Sbjct: 151 SDRTNQSCGAAPAGQEKYEL---DVSSRDVVR 179
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 341 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 454
++ + + E+ AEE +KA D + L+EKL AA+++
Sbjct: 356 KELKNSEEQKAEEEKKAKRDANDHVNQLQEKLGAAMRD 393
>SB_13066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 305 LGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 442
LG ++G E +E+ + I T +RK+ PD + L E L+A
Sbjct: 568 LGASDG---ENVEEDSKEIHLTCHSMRKSPPDTHTTSVELIESLEA 610
>SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0)
Length = 727
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 326 AXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHK 475
A + + ++ ER AEE R+ + E+ A R++ + A SH+
Sbjct: 434 AEDEARRQQEEAEREAEEARRQQEEAEREAEEARQQQEDAEDEYETVSHE 483
>SB_39744| Best HMM Match : Sybindin (HMM E-Value=3.6)
Length = 211
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 178 LEQQFNSLTKSKDAQDFSKAWKDGSESVLQQL 273
L Q LTK +D+S+AW G E +LQ++
Sbjct: 125 LAQASTKLTKRLTTKDWSRAWSSG-ELILQKM 155
>SB_4260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 178 LEQQFNSLTKSKDAQDFSKAWKDGSESVLQQL 273
L Q LTK +D+S+AW G E +LQ++
Sbjct: 304 LAQASTKLTKRLTTKDWSRAWSSG-ELILQKM 334
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.128 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,194,214
Number of Sequences: 59808
Number of extensions: 212929
Number of successful extensions: 919
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1099461690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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