Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_O01
(504 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 33 0.12
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 31 0.36
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 31 0.36
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 31 0.36
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 31 0.36
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 31 0.36
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 29 1.4
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 29 1.4
AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory car... 29 2.5
AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synapt... 29 2.5
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 3.3
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 28 3.3
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 28 3.3
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 3.3
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 3.3
Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical p... 27 5.8
Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical p... 27 5.8
Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical pr... 27 5.8
AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical... 27 5.8
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 27 7.7
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 305 LGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQ--NTVQESHK 475
+G A E +Q N+ + ++ K H DV+ ++ALR L A Q +T++++++
Sbjct: 24 IGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSALRTLLSAEKQLRDTIRDAYE 82
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 311 DANGKAXEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESHK 475
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+H+
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHR 443
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 311 DANGKAXEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESHK 475
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+H+
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHR 443
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 311 DANGKAXEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESHK 475
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+H+
Sbjct: 147 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHR 203
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 311 DANGKAXEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESHK 475
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+H+
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHR 443
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 160 KEFHKTLEQQFNSLTKSKDAQD-FSKAWKDGSESVLQ 267
+EFHKT E+ L K D + F AW DGS+ Q
Sbjct: 266 REFHKTAEEASKELRKHPDLWNRFQFAWLDGSDLASQ 302
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
protein C18H2.1 protein.
Length = 1770
Score = 30.7 bits (66), Expect = 0.63
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 121 DAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQ 222
D +F KDI+ K+ HKTLE + + K +D Q
Sbjct: 594 DGENFVKDIQKTYKKSHKTLESDSSPVLKLEDPQ 627
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 311 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESHKLA 481
D + EA E++R+N E ELR+ + D+ + +AL R KL+ + E ++A
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 482 XKVSSNV 502
++ + V
Sbjct: 1759 NELKNAV 1765
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 311 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESHKLA 481
D + EA E++R+N E ELR+ + D+ + +AL R KL+ + E ++A
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 482 XKVSSNV 502
++ + V
Sbjct: 1759 NELKNAV 1765
>AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory
carrier membrane protein protein.
Length = 335
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 293 SRAALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEK--NATALREKLQAAVQNTVQE 466
S +LG+ + + L + +Q++ER A+ELR ++++ + A L QN
Sbjct: 56 STGSLGNKSAGMDDELFRKQQDLERRAQELRMREEELDRRQRSAAGGNNLNTNAQNNAPR 115
Query: 467 SH 472
H
Sbjct: 116 PH 117
>AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synaptic
vesicle protein)homolog protein 1 protein.
Length = 335
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 293 SRAALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEK--NATALREKLQAAVQNTVQE 466
S +LG+ + + L + +Q++ER A+ELR ++++ + A L QN
Sbjct: 56 STGSLGNKSAGMDDELFRKQQDLERRAQELRMREEELDRRQRSAAGGNNLNTNAQNNAPR 115
Query: 467 SH 472
H
Sbjct: 116 PH 117
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 323 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 502
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 323 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 502
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 121 DAPDFFKDIEHHTKEFH--KTLEQQFNSLTKSKDAQDFSKAWKDGSES 258
+A ++F D++HHT F T + + +D D K W SE+
Sbjct: 525 EAREYFSDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDERKEWIRRSEN 572
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 323 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 502
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 358 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 417
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 323 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 502
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 323 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 502
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
>Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 323 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSS 496
KA E LEQ + + + + VEK + LQ V++ V E+ L+ VSS
Sbjct: 67 KAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSS 124
>Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 323 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSS 496
KA E LEQ + + + + VEK + LQ V++ V E+ L+ VSS
Sbjct: 76 KAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSS 133
>Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 323 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSS 496
KA E LEQ + + + + VEK + LQ V++ V E+ L+ VSS
Sbjct: 67 KAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSS 124
>Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 323 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSS 496
KA E LEQ + + + + VEK + LQ V++ V E+ L+ VSS
Sbjct: 76 KAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSS 133
>AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical
protein F57B10.4 protein.
Length = 691
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 139 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDF 228
KD+++H K+ H L Q + + + D DF
Sbjct: 67 KDVKNHQKKLHSFLAQSTDQVNSTIDKMDF 96
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = -3
Query: 133 SRERRVAPS-----LPWARAMQAKRTTNLAAMMCCRETE 32
+ E+R PS +PW +Q + ++LAA +CC+++E
Sbjct: 22 NHEKRYGPSQVHFDIPWRMKIQ-RSGSDLAAFLCCQKSE 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.128 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,576,357
Number of Sequences: 27780
Number of extensions: 149638
Number of successful extensions: 753
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -