Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_O01
         (504 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   5.5  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   7.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.3  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +2

Query: 287 RVSRAALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 466
           +VS AAL     KA + +EQ  QN++   +     H  ++KNA    +K    +  ++Q+
Sbjct: 34  KVSWAALKKM--KAGD-MEQDDQNLKCYLKCFMTKHGILDKNAEVDVQKALRHLPRSMQD 90

Query: 467 SHK 475
           S K
Sbjct: 91  STK 93


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 251 EPSFQALLKSCASFDLVSELN 189
           EP    +  + ASFD +SE+N
Sbjct: 59  EPLLVGMDLTIASFDAISEVN 79


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 23/66 (34%), Positives = 30/66 (45%)
 Frame = +3

Query: 60  AKFVVLFACIALAQGSDGATRRSRLLQGHRTPHQGVP*DFRTTV*LAHQVKGRTGLQQGL 239
           A+ VVLF     A+G   A RRS L Q    P Q +  D         Q+K   GL++  
Sbjct: 197 ARAVVLFTRAEDARGILEAARRSNLSQ----PFQWLASDG-----WGRQIKLVEGLEEEA 247

Query: 240 EGRLRV 257
           EG + V
Sbjct: 248 EGAITV 253


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 23/66 (34%), Positives = 30/66 (45%)
 Frame = +3

Query: 60  AKFVVLFACIALAQGSDGATRRSRLLQGHRTPHQGVP*DFRTTV*LAHQVKGRTGLQQGL 239
           A+ VVLF     A+G   A RRS L Q    P Q +  D         Q+K   GL++  
Sbjct: 287 ARAVVLFTRAEDARGILEAARRSNLSQ----PFQWLASDG-----WGRQIKLVEGLEEEA 337

Query: 240 EGRLRV 257
           EG + V
Sbjct: 338 EGAITV 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.128    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,547
Number of Sequences: 438
Number of extensions: 1713
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)