Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_O01
(504 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 32 0.25
At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida... 29 1.8
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 29 2.4
At2g19950.1 68415.m02332 expressed protein contains 2 transmembr... 29 2.4
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 28 3.1
At4g35295.1 68417.m05016 homoserine kinase, putative / HSK, puta... 28 3.1
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 28 3.1
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 28 3.1
At3g04750.1 68416.m00511 pentatricopeptide (PPR) repeat-containi... 28 3.1
At2g36070.1 68415.m04429 mitochondrial import inner membrane tra... 28 3.1
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 28 4.1
At3g58840.1 68416.m06558 expressed protein 28 4.1
At3g50370.1 68416.m05508 expressed protein 27 5.4
At2g06750.1 68415.m00753 hypothetical protein similar to At5g282... 27 5.4
At5g51370.1 68418.m06369 F-box family protein similar to unknown... 27 7.2
At3g09980.1 68416.m01198 expressed protein contains Pfam profile... 27 7.2
At5g56420.2 68418.m07043 F-box family protein contains F-box dom... 27 9.5
At5g56420.1 68418.m07042 F-box family protein contains F-box dom... 27 9.5
At4g08025.1 68417.m01287 hypothetical protein 27 9.5
At2g36410.2 68415.m04470 expressed protein contains Pfam profile... 27 9.5
At2g36410.1 68415.m04469 expressed protein contains Pfam profile... 27 9.5
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 31.9 bits (69), Expect = 0.25
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 311 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHK 475
+A GKA E + +++N+E+ E R+ ++ L+E+ A Q Q++ +
Sbjct: 284 EAKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTRE 338
>At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase,
putative / ACC oxidase, putative nearly identical to ACC
oxidase (ACC ox1) GI:587086 from [Brassica oleracea]
Length = 320
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 94 WPKAAMVRRDAP-DFFKDIEHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKD 246
W +V P D IE TK+ +KT EQ+FN + KSK + +D
Sbjct: 34 WGFFEIVNHGLPHDLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVED 86
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 347 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSN 499
S N+ RT ++ HP+ + + +RE + + ++E+ +L V N
Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59
>At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane
domains; weak similarity to HPSR2 - heavy chain
potential motor protein (GI:871048) [Giardia
intestinalis]
Length = 702
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 293 SRAALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREK 433
++AAL + + +AL + ER AEE R AH + K A RE+
Sbjct: 368 NQAALNEGKLSSLQALREELATTERRAEEERSAH-NATKMAAMERER 413
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 28.3 bits (60), Expect = 3.1
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 332 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ--ES-HKLAXKVSSN 499
EAL+ S Q + AE LRKA + E + L +L+ A + Q ES +L K+S++
Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQLHESVQRLEEKLSNS 1055
>At4g35295.1 68417.m05016 homoserine kinase, putative / HSK,
putative similar to homoserine kinase [Arabidopsis
thaliana] GI:4927412
Length = 111
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 137 KKSGASRRTIAALGQSDAGEENYELG 60
K++GA RTI A+ D E+ YE+G
Sbjct: 53 KEAGAFGRTITAVAVIDTAEKGYEIG 78
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 323 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKL 478
KA + + +IE EELR HPD + N L+ K+ V+ +Q S +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSI 237
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 323 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKL 478
KA + + +IE EELR HPD + N L+ K+ V+ +Q S +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSI 237
>At3g04750.1 68416.m00511 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 661
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = -2
Query: 245 SFQALLKSCASFDLVSELNCCSKVLWNSLVWCSMSLKKSGASRRTIAALGQSDAGEENYE 66
SF + +K +VS LWNSLV M L G + + A + D N
Sbjct: 144 SFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVM 203
Query: 65 LGGH 54
+ G+
Sbjct: 204 IVGY 207
>At2g36070.1 68415.m04429 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 469
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 341 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 502
+++ + + AEEL+ D++ EKL Q E+ +A KVSS+V
Sbjct: 66 QKTVKEFKERAEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSV 119
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 1060
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +2
Query: 353 QNIERTAEELRKAHPDVEKNATALREKLQAA---VQNTVQE 466
+++E+ +E RKAH + A AL +LQAA V N QE
Sbjct: 876 KSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQE 916
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 323 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHK 475
KA + + + E+ AE LRK +VEK L K+ ++E K
Sbjct: 128 KALAEIVEKLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVLEVREMEEKSK 178
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 27.5 bits (58), Expect = 5.4
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 341 EQSRQNIERTAEELRKAHPDVEKNATALRE--KLQAAVQNTVQESHKLAXK 487
EQ R R AEELRK+ + EK+ + E + QAA Q ++ K++ +
Sbjct: 531 EQERLEATRRAEELRKSKEE-EKHRLFMEEERRKQAAKQKLLELEEKISRR 580
>At2g06750.1 68415.m00753 hypothetical protein similar to At5g28270,
At2g12100, At2g05450, At1g45090, At2g16180
Length = 435
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 299 PWRLLAKALSCCSTDSEPSFQALLKSCASF 210
PW+ LA AL + SF L CASF
Sbjct: 133 PWKKLALALIIIVVEGRTSFLLTLDRCASF 162
>At5g51370.1 68418.m06369 F-box family protein similar to unknown
protein (emb|CAB82288.1) ; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 355
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 272 SCCSTDSEPSFQALLKSCASFDLVSELNCC 183
SC D+ P + LL+SC + + + CC
Sbjct: 286 SCRKIDASPGPEKLLRSCPAMESLQLKRCC 315
>At3g09980.1 68416.m01198 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 178
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 338 LEQSRQNIERTA-EELRKAHPDVEKNATALREKLQAAVQNTVQESHKLA 481
+ + + + RTA R ++EK +RE++QA + +E+ +LA
Sbjct: 38 MSKEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLA 86
>At5g56420.2 68418.m07043 F-box family protein contains F-box domain
Pfam:PF00646
Length = 422
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 355 LPRLFQSLXGLAVRVSERCPGDS 287
LPR+ S L V +RCPGD+
Sbjct: 172 LPRIISSCSSLEDLVVQRCPGDN 194
>At5g56420.1 68418.m07042 F-box family protein contains F-box domain
Pfam:PF00646
Length = 422
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 355 LPRLFQSLXGLAVRVSERCPGDS 287
LPR+ S L V +RCPGD+
Sbjct: 172 LPRIISSCSSLEDLVVQRCPGDN 194
>At4g08025.1 68417.m01287 hypothetical protein
Length = 115
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 495 EDTXFANLWDSCTVFCTAACSFSRRAVAF 409
E+ +LWD+C V T C+ + AV F
Sbjct: 28 EEAEAKSLWDTCLVKITPKCALNIIAVVF 56
>At2g36410.2 68415.m04470 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 192
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 347 SRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESHKLA 481
SR++ E T L R ++EK +RE++QA + QE+ +L+
Sbjct: 54 SREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
>At2g36410.1 68415.m04469 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 195
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 347 SRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESHKLA 481
SR++ E T L R ++EK +RE++QA + QE+ +L+
Sbjct: 54 SREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.128 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,282,674
Number of Sequences: 28952
Number of extensions: 142104
Number of successful extensions: 706
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 898188928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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