Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_N21
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 96 1e-20
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 94 5e-20
U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal prote... 33 0.10
AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal pro... 33 0.14
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 32 0.31
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.72
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 27 6.7
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 27 6.7
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 27 8.9
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 27 8.9
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 27 8.9
AC024882-7|AAF60924.1| 285|Caenorhabditis elegans Hypothetical ... 27 8.9
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 96.3 bits (229), Expect = 1e-20
Identities = 54/112 (48%), Positives = 65/112 (58%)
Frame = +2
Query: 116 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 295
MRYV+AYLLAVLGG P D++ ILS+VG++ADAE K V++ L GK VE+LIA G
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60
Query: 296 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKEDXKXXXKEXSESDDDMGFGLFD 451
L S+ G + K K KE ESDDDMGFGLFD
Sbjct: 61 GLVSVSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKE--ESDDDMGFGLFD 110
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 94.3 bits (224), Expect = 5e-20
Identities = 51/112 (45%), Positives = 65/112 (58%)
Frame = +2
Query: 116 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 295
M+Y+ AYLLA LGG +P+A DV K+L + G++ D E V+ L GK + ++IA G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 296 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKEDXKXXXKEXSESDDDMGFGLFD 451
KLSS+P GG EE K K KE ESDDDMGFGLFD
Sbjct: 61 KLSSVPSGGSAPAAAAPSGGAAPKAEEKK---KEEPKE--ESDDDMGFGLFD 107
>U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal protein
P1 homolog protein.
Length = 111
Score = 33.5 bits (73), Expect = 0.10
Identities = 25/90 (27%), Positives = 34/90 (37%)
Frame = +2
Query: 182 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXX 361
+ +L + +E + L G DV+ LI + S P
Sbjct: 28 IATLLKAANVEFEPNWPGLFAKALEGVDVKNLITSVSSGAGSGPAPAAAAAAPAAGGAAP 87
Query: 362 XXXEEXKEDXKXXXKEXSESDDDMGFGLFD 451
+ KE+ K ESDDDMGFGLFD
Sbjct: 88 AAETKKKEEPK------EESDDDMGFGLFD 111
>AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal
protein, acidic protein 1 protein.
Length = 111
Score = 33.1 bits (72), Expect = 0.14
Identities = 23/67 (34%), Positives = 27/67 (40%)
Frame = +2
Query: 251 LNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXXEEXKEDXKXXXKEXSESDDD 430
L G DV+ LI + S P + KE+ K ESDDD
Sbjct: 51 LEGVDVKNLITSVSSGAGSGPAPAAAAAAPAAGGAAPAAETKKKEEPK------EESDDD 104
Query: 431 MGFGLFD 451
MGFGLFD
Sbjct: 105 MGFGLFD 111
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.9 bits (69), Expect = 0.31
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 161 TTPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 280
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.9 bits (69), Expect = 0.31
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 161 TTPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 280
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 30.7 bits (66), Expect = 0.72
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 416 ESDDDMGFGLFD 451
ESDDDMGFGLFD
Sbjct: 301 ESDDDMGFGLFD 312
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 276 SCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAAT*RIF*VLI 100
S +T+ P ++T + S S PT + ST+ AA V+ T+S + + +F VLI
Sbjct: 2254 SVATAGPTGPILTVVPVS---SAPTSGAVSSTATAAPVITTTKTSSVLSVSFSMFIVLI 2309
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 27.5 bits (58), Expect = 6.7
Identities = 23/84 (27%), Positives = 37/84 (44%)
Frame = -2
Query: 258 PLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAAT*RIF*VLIDTKRVMP 79
PLSS+ + S +A +SI ++ ++ + PPST+S A ++ P
Sbjct: 201 PLSSITSISSSAAGSSISAPSTSQPSTTSSLITSPPSTSSSSMA----------PRKTPP 250
Query: 78 KE*RSSLNKRQQVRKNXSXKVSFD 7
SSL KRQ +V F+
Sbjct: 251 NASSSSLIKRQSQDVQEQQRVDFE 274
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +2
Query: 200 SVGIEADAEKLKKVITELNGK---DVEQLI 280
SVG ADA+K K I ++NGK DV++L+
Sbjct: 297 SVGKWADAKKQLKKIAKMNGKSNVDVDELV 326
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +2
Query: 200 SVGIEADAEKLKKVITELNGK---DVEQLI 280
SVG ADA+K K I ++NGK DV++L+
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELV 309
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +2
Query: 200 SVGIEADAEKLKKVITELNGK---DVEQLI 280
SVG ADA+K K I ++NGK DV++L+
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELV 309
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 276 SCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYA 130
S ST P+S+ + + + SIP+ S+ + + PPS+ASK A
Sbjct: 436 SISTVNPMSASMFVPATAKEISIPSNSSATSSPFKSSSIAPPSSASKPA 484
>AC024882-7|AAF60924.1| 285|Caenorhabditis elegans Hypothetical
protein Y9C9A.12 protein.
Length = 285
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 79 RHYTFRVN*DLKNALRGRVFTGCAGWQDHASC 174
+H+T R++ D+KN R + FT + SC
Sbjct: 98 KHFTIRISDDIKNKNRDQCFTRILNTLNSKSC 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,310,861
Number of Sequences: 27780
Number of extensions: 143763
Number of successful extensions: 448
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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