Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_N17
(458 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|... 88 7e-17
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/... 79 3e-14
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa... 78 1e-13
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve... 72 7e-12
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina... 66 3e-10
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung... 57 2e-07
UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177, w... 47 2e-04
UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes va... 47 2e-04
UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyosteli... 47 2e-04
UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22; Viri... 46 4e-04
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater... 44 0.002
UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containin... 42 0.005
UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=... 42 0.005
UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3; ... 39 0.045
UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=... 39 0.045
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ... 39 0.060
UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6; T... 38 0.079
UniRef50_Q9U5R5 Cluster: Putative ribosomal protein; n=1; Entodi... 35 0.97
UniRef50_Q75H88 Cluster: Expressed protein, 3'-partial; n=5; Mag... 33 3.0
UniRef50_Q9BYF7 Cluster: SCCA2b; n=12; Eutheria|Rep: SCCA2b - Ho... 32 6.8
UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10... 32 6.8
UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13... 32 6.8
UniRef50_Q820B4 Cluster: Apolipoprotein N-acyltransferase; n=4; ... 32 6.8
UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3; ... 31 9.0
UniRef50_Q9FKZ0 Cluster: Probable disease resistance protein At5... 31 9.0
>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
melanogaster|Rep: RH14088p - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 88.2 bits (209), Expect = 7e-17
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +1
Query: 109 KVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRNMXPEL 267
KVTWTVLYRRK +KG EEE +KKRT RTQKFQRAIVGASL++I+A RNM PE+
Sbjct: 7 KVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 59
>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
Homo sapiens (Human)
Length = 157
Score = 79.4 bits (187), Expect = 3e-14
Identities = 37/53 (69%), Positives = 41/53 (77%)
Frame = +1
Query: 109 KVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRNMXPEL 267
++ WTVLYRRK KKGQ EE KKRT R KFQRAI GASL+DIMA RN PE+
Sbjct: 48 QINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEV 100
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +3
Query: 21 RPWIKVDGKTFTFLNSKCEXAHLMRRNPR*SNMDCPVQAQVQKGPRGRTSKE 176
R + + DGK F FLN+KCE A L +RNPR N + + +KG K+
Sbjct: 19 RRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKK 70
>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 157
Score = 77.8 bits (183), Expect = 1e-13
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +1
Query: 109 KVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRNMXPEL 267
++ WTVLYRRK KKGQ EE +KKRT R KFQRAI GASL++I+A RN PE+
Sbjct: 48 QINWTVLYRRKHKKGQSEEVSKKRTRRAVKFQRAITGASLAEILAKRNQKPEV 100
Score = 47.6 bits (108), Expect = 1e-04
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +3
Query: 21 RPWIKVDGKTFTFLNSKCEXAHLMRRNPR*SNMDCPVQAQVQKGPRGRTSKE 176
R + +VDGK F FLN+KCE A L +RNPR N + + +KG SK+
Sbjct: 19 RRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEVSKK 70
>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 143
Score = 71.7 bits (168), Expect = 7e-12
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +1
Query: 109 KVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRNMXPEL 267
+VTWTVLYR K KKG +EE +KKRT R KFQR++ GASL +I+A RN PE+
Sbjct: 28 EVTWTVLYRCKHKKGTQEEVSKKRTRRNIKFQRSVQGASLDNILAKRNQKPEV 80
Score = 38.7 bits (86), Expect = 0.060
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +3
Query: 45 KTFTFLNSKCEXAHLMRRNPR*SNMDCPVQAQVQKGPRGRTSKE 176
K F FLN +CE A LMRRNPR + + +KG + SK+
Sbjct: 7 KVFNFLNKRCERALLMRRNPREVTWTVLYRCKHKKGTQEEVSKK 50
>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 161
Score = 66.5 bits (155), Expect = 3e-10
Identities = 33/52 (63%), Positives = 36/52 (69%)
Frame = +1
Query: 109 KVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRNMXPE 264
K++WT LYRR KKG EE AKKRT RT K QRAIVGASL I R+ PE
Sbjct: 48 KISWTTLYRRMHKKGISEEVAKKRTRRTVKHQRAIVGASLDVIKERRSQRPE 99
>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +1
Query: 109 KVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRNMXPEL 267
++ WTVL+R+ KKG EE AKKR+ +T K QR I GASL I R++ PE+
Sbjct: 48 RIAWTVLFRKHHKKGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPEV 100
>UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +1
Query: 109 KVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXR 249
++ WTV +RR KK + +E AKKR R K QRAIVG SL +I R
Sbjct: 50 EIQWTVAWRRLNKKIKTDEGAKKRRIRNLKVQRAIVGISLEEIRRRR 96
>UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes
vannus|Rep: Ribosomal protein L24 - Euplotes vannus
Length = 155
Score = 46.8 bits (106), Expect = 2e-04
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +1
Query: 112 VTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRN 252
+TWT ++RRK +KG + A+ RT RT + +A+VG SL++I RN
Sbjct: 51 LTWTPMWRRKNRKGAYAKAARVRTKRTTRKMKAVVGMSLAEINRIRN 97
>UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L24 -
Dictyostelium discoideum AX4
Length = 127
Score = 46.8 bits (106), Expect = 2e-04
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +1
Query: 112 VTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRNMXPEL 267
+ W+++YRR +K + AKK+ +T+K +R IVGASL I R PE+
Sbjct: 49 IRWSMVYRRIYKNTTTDVSAKKKARKTKKVERNIVGASLEVIQQKRAQKPEV 100
>UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22;
Viridiplantae|Rep: 60S ribosomal protein L24-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 164
Score = 46.0 bits (104), Expect = 4e-04
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +1
Query: 106 AKVTWTVLYRRKFKKGQEEEQAKKRTTRTQK-FQRAIVGASLSDIMAXRNMXPEL 267
+K+ WT +YR++ KK +E K+R T+K + R+IVGA+L I R PE+
Sbjct: 49 SKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEV 103
>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
Bilateria|Rep: 60S ribosomal protein L24 -
Caenorhabditis elegans
Length = 159
Score = 43.6 bits (98), Expect = 0.002
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 112 VTWTVLYRRKFKKG---QEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRNMXPE 264
+ WTVLYR K KKG QE+ KK Q RA+ G SL I+A RN +
Sbjct: 49 IRWTVLYRIKNKKGTHGQEQVTRKKTKKSVQVVNRAVAGLSLDAILAKRNQTED 102
>UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L24e containing protein - Tetrahymena
thermophila SB210
Length = 158
Score = 42.3 bits (95), Expect = 0.005
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 109 KVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRNM 255
K+TWT+ RR +KK + + A+K+ R RAIVG SL +I +N+
Sbjct: 50 KITWTIARRRLWKKVKATDIAQKKKKRNVTVARAIVGISLEEINRRKNL 98
>UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L24, putative -
Theileria parva
Length = 159
Score = 42.3 bits (95), Expect = 0.005
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +1
Query: 106 AKVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRN 252
AK+ W + +R+ KK Q E +KR+ +T + Q+AIVG SL D+ + R+
Sbjct: 58 AKLKWNLAWRKANKKFQTELFNRKRSKKTSRPQKAIVGLSLDDLKSKRS 106
>UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 178
Score = 39.1 bits (87), Expect = 0.045
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 106 AKVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDI 237
AK+ WT +RR KK + E ++R +T K Q+A+ G S+ DI
Sbjct: 54 AKLRWTQTWRRNNKKTKVEATQRRRYKKTIKVQKAVCGLSVEDI 97
>UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=2;
Plasmodium (Vinckeia)|Rep: 60S ribosomal protein L24,
putative - Plasmodium chabaudi
Length = 130
Score = 39.1 bits (87), Expect = 0.045
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 106 AKVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDI 237
AK+ WT +RR KK + E ++R +T K Q+A+ G S+ DI
Sbjct: 54 AKLRWTQTWRRNNKKTKVEATQRRRYKKTIKVQKAVCGLSVEDI 97
>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L24 - Entamoeba histolytica HM-1:IMSS
Length = 163
Score = 38.7 bits (86), Expect = 0.060
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 109 KVTWTVLYRRKFKKGQEEEQA-KKRTTRTQKFQRAIVGASLSDI 237
KV WT +YR+ KKGQ+ E KK+T R K R G S +I
Sbjct: 50 KVFWTAIYRQLNKKGQQNELVEKKKTRRVIKVNRGYSGISAEEI 93
>UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L24, putative -
Leishmania major
Length = 124
Score = 38.3 bits (85), Expect = 0.079
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 112 VTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXR 249
+ WT YRR +K + ++R R + QRAIVGA LS I R
Sbjct: 53 IPWTRTYRRIHRKTTTDRVNRRRAARAVRVQRAIVGADLSYIQEVR 98
>UniRef50_Q9U5R5 Cluster: Putative ribosomal protein; n=1;
Entodinium caudatum|Rep: Putative ribosomal protein -
Entodinium caudatum
Length = 110
Score = 34.7 bits (76), Expect = 0.97
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 109 KVTWTVLYRRKFKKGQEEEQAKK-RTTRTQKFQRAIVGASLSDI 237
K+ W + +R KKGQ EE KK + + ++ +AIVG S+ +I
Sbjct: 5 KIRWNLKWRTAHKKGQVEEAKKKVQKQKKERQVKAIVGLSVEEI 48
>UniRef50_Q75H88 Cluster: Expressed protein, 3'-partial; n=5;
Magnoliophyta|Rep: Expressed protein, 3'-partial - Oryza
sativa subsp. japonica (Rice)
Length = 277
Score = 33.1 bits (72), Expect = 3.0
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 227 SEAPTIARWNFWVLVVRFFACSSSWP-FLNLRLYRTVHVTLARIPPHQMG 81
+E P+ + +L + F CSS+ P FL+ R R HV +A PP G
Sbjct: 65 AEGPSSSMSPTSILETKQFCCSSAMPPFLSERSLRKAHVEMAAAPPEPAG 114
>UniRef50_Q9BYF7 Cluster: SCCA2b; n=12; Eutheria|Rep: SCCA2b - Homo
sapiens (Human)
Length = 369
Score = 31.9 bits (69), Expect = 6.8
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 37 WMEKPSHS*IQNVXPPI**GGILAKVTWTVLYRRKFKKGQEEEQAKKRTTRTQKF 201
W+E ++ I+N+ P G + T VL + KGQ E + KK T+ +KF
Sbjct: 150 WVESQTNEKIKNLFPD----GTIGNDTTLVLVNAIYFKGQWENKFKKENTKEEKF 200
>UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 199
Score = 31.9 bits (69), Expect = 6.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 27 WIKVDGKTFTFLNSKCEXAHLMRRNPR 107
+++ D K F F SKC A RRNPR
Sbjct: 21 FVRNDAKEFRFCRSKCHKAFKQRRNPR 47
>UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 198
Score = 31.9 bits (69), Expect = 6.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 27 WIKVDGKTFTFLNSKCEXAHLMRRNPR 107
+++ D K F F SKC A RRNPR
Sbjct: 21 FVRNDAKEFRFCRSKCHKAFKQRRNPR 47
>UniRef50_Q820B4 Cluster: Apolipoprotein N-acyltransferase; n=4;
Coxiella burnetii|Rep: Apolipoprotein N-acyltransferase
- Coxiella burnetii
Length = 485
Score = 31.9 bits (69), Expect = 6.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 230 LSEAPTIARWNFWVLVVRFFACSSSWPFLNLRLYRTVHVTLA 105
L P +A W W+ FF +SW ++++ + +V LA
Sbjct: 38 LRSRPLVAWWRGWLFGFGFFGAGASWVYVSIHHFGNANVPLA 79
>UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3;
cellular organisms|Rep: 60S ribosomal protein L24 -
Entamoeba histolytica HM-1:IMSS
Length = 179
Score = 31.5 bits (68), Expect = 9.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 27 WIKVDGKTFTFLNSKCEXAHLMRRNPR 107
+++ D K F F SKC + M+RNPR
Sbjct: 21 FVRNDAKVFWFCRSKCHKSFKMKRNPR 47
>UniRef50_Q9FKZ0 Cluster: Probable disease resistance protein
At5g66910; n=3; Arabidopsis thaliana|Rep: Probable
disease resistance protein At5g66910 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 815
Score = 31.5 bits (68), Expect = 9.0
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -1
Query: 245 LAIMSLSEAPTIARWNFWVLVVRFFACSSSWPFLNLRLYRTVHVTLARIPPHQMG 81
+A M + TIA F+ + F+C SS P L + V VTL IP Q+G
Sbjct: 572 IAEMKKLKVLTIANHGFYPARLSNFSCLSSLPNLKRIRFEKVSVTLLDIPQLQLG 626
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 327,569,408
Number of Sequences: 1657284
Number of extensions: 4908194
Number of successful extensions: 11988
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 11690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11974
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -