Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_N17
         (458 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p pro...    88   5e-18
AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p pro...    88   5e-18
AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA...    88   5e-18

>AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p
           protein.
          Length = 123

 Score = 88.2 bits (209), Expect = 5e-18
 Identities = 41/53 (77%), Positives = 47/53 (88%)
 Frame = +1

Query: 109 KVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRNMXPEL 267
           KVTWTVLYRRK +KG EEE +KKRT RTQKFQRAIVGASL++I+A RNM PE+
Sbjct: 7   KVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 59


>AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p
           protein.
          Length = 155

 Score = 88.2 bits (209), Expect = 5e-18
 Identities = 41/53 (77%), Positives = 47/53 (88%)
 Frame = +1

Query: 109 KVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRNMXPEL 267
           KVTWTVLYRRK +KG EEE +KKRT RTQKFQRAIVGASL++I+A RNM PE+
Sbjct: 48  KVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 100



 Score = 47.6 bits (108), Expect = 8e-06
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +3

Query: 30  IKVDGKTFTFLNSKCEXAHLMRRNPR*SNMDCPVQAQVQKGPRGRTSKE 176
           +K+DGK+FTFL+ KCE ++LM+RNPR        + + +KG     SK+
Sbjct: 22  VKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGIEEEASKK 70


>AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA
           protein.
          Length = 155

 Score = 88.2 bits (209), Expect = 5e-18
 Identities = 41/53 (77%), Positives = 47/53 (88%)
 Frame = +1

Query: 109 KVTWTVLYRRKFKKGQEEEQAKKRTTRTQKFQRAIVGASLSDIMAXRNMXPEL 267
           KVTWTVLYRRK +KG EEE +KKRT RTQKFQRAIVGASL++I+A RNM PE+
Sbjct: 48  KVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 100



 Score = 47.6 bits (108), Expect = 8e-06
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +3

Query: 30  IKVDGKTFTFLNSKCEXAHLMRRNPR*SNMDCPVQAQVQKGPRGRTSKE 176
           +K+DGK+FTFL+ KCE ++LM+RNPR        + + +KG     SK+
Sbjct: 22  VKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGIEEEASKK 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,738,887
Number of Sequences: 53049
Number of extensions: 233878
Number of successful extensions: 673
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)