Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_N16
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    28   0.077
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    27   0.13 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    27   0.13 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   3.8  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   3.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.9 bits (59), Expect = 0.077
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +2

Query: 212 ESEQVIFLDAGDLKKSKKVLQDIEKDNEDVEMSSDDENVVVDSEG-GKKRVFNTKTLKDQ 388
           E E+ +  D  + +K ++  +D +KD   +E   +DE+     E   KK+    K  +D+
Sbjct: 218 EREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDE 277

Query: 389 --NGQYPVW 409
             N   P+W
Sbjct: 278 ELNKTKPIW 286


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
 Frame = -1

Query: 362 KLFSCR-LHYRPQRFHHLNSFRRLH---YPFRC 276
           K F C+  H R  R HHL +  RLH    P+RC
Sbjct: 8   KPFECQECHKRFTRDHHLKTHMRLHTGERPYRC 40


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
 Frame = -1

Query: 362 KLFSCR-LHYRPQRFHHLNSFRRLH---YPFRC 276
           K F C+  H R  R HHL +  RLH    P+RC
Sbjct: 161 KPFECQECHKRFTRDHHLKTHMRLHTGERPYRC 193


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 101 RKCRAIKRERYAVKELARLKKMLGVKDEEKPAG 199
           RK   I  E     +L ++K ++ V+DE KP G
Sbjct: 150 RKEEYISFESKVFHKLKKMKYLVEVQDEVKPRG 182


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 323 NVVVDSEGGKKRVFNT 370
           N+ V S+G  K  FNT
Sbjct: 434 NIEVQSQGSSKNTFNT 449


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 257 SKKVLQDIEKDNEDVEMSSDDENVVVDSE 343
           SKK  +D E ++   +   DDEN+ VD +
Sbjct: 21  SKK--EDEEVEHRLSDRDDDDENITVDDD 47


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 44  SKYFCF*NAMAKSIRSRWKR 103
           SKY  F N M      +W+R
Sbjct: 697 SKYLDFINVMTYDFHGQWER 716


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,282
Number of Sequences: 336
Number of extensions: 2556
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)