Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_N16
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20134| Best HMM Match : SASP_gamma (HMM E-Value=5.6) 44 1e-04
SB_13055| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_15161| Best HMM Match : MAP1B_neuraxin (HMM E-Value=2.7) 31 0.82
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18) 31 1.1
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 30 1.4
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 29 2.5
SB_8817| Best HMM Match : I-set (HMM E-Value=0) 29 3.3
SB_47134| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 29 4.4
SB_16245| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.061) 29 4.4
SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.4
SB_37688| Best HMM Match : Thioredoxin (HMM E-Value=5) 29 4.4
SB_52234| Best HMM Match : BRF1 (HMM E-Value=0.85) 28 5.8
SB_44868| Best HMM Match : Radial_spoke (HMM E-Value=0) 28 5.8
SB_22293| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_27494| Best HMM Match : MFAP1_C (HMM E-Value=0) 28 5.8
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 28 7.6
SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_58709| Best HMM Match : CRA_rpt (HMM E-Value=1.3) 28 7.6
SB_17534| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.51) 28 7.6
>SB_20134| Best HMM Match : SASP_gamma (HMM E-Value=5.6)
Length = 126
Score = 44.0 bits (99), Expect = 1e-04
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Frame = +2
Query: 71 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKD--EEKPAGSEVMESEQVIFLDAG 244
MAKS+RS+WKRK RA KR++ K +L M+G D ++ E+ +
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNKEKVKQKLLDMVGTTDIVKDVTMAENTSTPEKQSNVKGN 60
Query: 245 DLKKSKKVLQDIEK----DNE-DVEMSSDDENVVVDSEGGKKRVFNT-KTLK 382
+++ +KV + E+ D+ DV+M +++ V S+ KK+ F + KT+K
Sbjct: 61 NIEHVEKVTANNEETMAMDSAGDVDM-GEEKRVTTKSKYVKKKKFKSKKTMK 111
>SB_13055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +2
Query: 179 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKR 358
D+E+ A E++ E+ + LD G L ++ D+E +ED MS + +
Sbjct: 360 DDEQDAYEEILSDEEEMSLDDGTLDEASVQFADMELYSEDAWMSVSVSFNPYQCDLSQLM 419
Query: 359 VFNTKTLKDQNGQY 400
KT +D +GQ+
Sbjct: 420 ACVIKTKEDSDGQH 433
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 31.5 bits (68), Expect = 0.62
Identities = 20/89 (22%), Positives = 44/89 (49%)
Frame = +2
Query: 77 KSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKK 256
K + + K+K + K+ + + + KKM K+EE G + +E+E + +++
Sbjct: 26 KKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKKEEEAEVGEKTLEAEN----EEEKIEE 81
Query: 257 SKKVLQDIEKDNEDVEMSSDDENVVVDSE 343
++K + EK E+ + ++EN + E
Sbjct: 82 TEKEKDEEEKIEEEEKEGGEEENEEEEEE 110
>SB_15161| Best HMM Match : MAP1B_neuraxin (HMM E-Value=2.7)
Length = 210
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 257 SKKVLQDIEKDNEDVEM--SSDDENVVVDSEGGKKRVFNTKTLKDQ 388
S K + + D DV SSDD + DSEG +K+VF++ + +++
Sbjct: 133 SAKKISTVSADIRDVSTDGSSDDFSAAADSEGDEKQVFDSSSDEEE 178
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 137 VKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDA-GDLKKSKKVLQDIEKDNEDVEMSS 313
V EL + K+ L + E E +E E + D LKK ++ L+DI++D +D S
Sbjct: 1425 VHELEKAKRSLEQQLAEMKQTMEELEDELQVKEDGLRQLKKYQQQLKDIQRDLDDARASR 1484
Query: 314 DD 319
D+
Sbjct: 1485 DE 1486
>SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18)
Length = 1051
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Frame = +2
Query: 110 RAIKRERYAVKE-LARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEK 286
R ++ ER+ +E +A L + L + K + + I DL+K ++Q + K
Sbjct: 240 REVEEERHRYEEEIAHLTEQLECMERTKTEAEDKLAEMPNIAQRITDLEK---LVQQLTK 296
Query: 287 DNEDVEMSSDDENVVVDSEGGKKRVFN--TKTLKDQ 388
+N +++ + DD +V ++ G +V TK+L D+
Sbjct: 297 ENNNLKHTKDDALLVQLTQNGHYKVQQEPTKSLADE 332
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = +2
Query: 116 IKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQV----IFLDAGDLKKSKKVLQDIE 283
++ YAVKE + K+ V+D + A E EQV I + A D K+ + E
Sbjct: 1951 VEDSEYAVKEEQEIYKLEHVEDTQDEAFKTTHEREQVEPSLIIIAAEDTKEHEPADSRGE 2010
Query: 284 KDNEDVEMS---SDDENVVV 334
++ D+E++ +D+ +VV
Sbjct: 2011 EETLDIEVAHTLEEDQMIVV 2030
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 167 LGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKD-NEDVEMSSDDENVVVDSE 343
+G+K EE+ E+ E ++ I LD + ++QD+E+ E++E+S+ + + D
Sbjct: 2950 VGLKHEERVNDEEIKEKDEKIHLD------EENIIQDLEETFEEELEVSAVETSKNEDER 3003
Query: 344 GGK 352
GK
Sbjct: 3004 RGK 3006
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = +2
Query: 239 AGDLKKSKKVLQDIEKDNEDVEMSSDDENVVVDSE 343
+GD+ K+K+ L++++K E++E + D N + D+E
Sbjct: 3437 SGDVNKNKEELENVKKLKEELEGAKDKLNSLNDAE 3471
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 251 KKSKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLK 382
K+SKK+ +D + DN+D E DD+ D K + + +T K
Sbjct: 1003 KESKKIPEDDDYDNDDDEDEDDDDLKRSDKPEKKSKAAHPETRK 1046
>SB_8817| Best HMM Match : I-set (HMM E-Value=0)
Length = 2526
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +2
Query: 182 EEKPAGSEVMESEQVIFLDAGDLKKSKKVL----QDIEKDNEDVEMSSDDENVVVDSEGG 349
+E+P E E + + GD+K + +V +E +DV +S D+ + + +G
Sbjct: 440 KEEPTFLESDEIKPFEVTEEGDIKMTAQVTGKPQPSVEWFKDDVPVSPDEHITITEEDGT 499
Query: 350 KKRVFNTKTLKDQNGQYPV 406
V T KD+ G Y V
Sbjct: 500 YSLVIKEPTKKDE-GTYTV 517
>SB_47134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +2
Query: 272 QDIEKDNEDVEMSSD--DENVVVDSEGGKKRVFNTKTL 379
+D E++ E+ E+ ++ +EN V++ E GK RV + KTL
Sbjct: 185 EDSEEEEEEPEIPNELEEENEVLNQELGKLRVQHQKTL 222
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Frame = +2
Query: 113 AIKRERYAVKELARLKK---MLGVKDEEKPAGSE-VMESEQV 226
A+K + A +ELA + K M+ V+D+E+P+GS+ V++ E V
Sbjct: 136 ALKPKFAASEELAEMSKKFVMVNVEDKEEPSGSQFVVDGEYV 177
>SB_16245| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.061)
Length = 220
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/84 (27%), Positives = 43/84 (51%)
Frame = +2
Query: 134 AVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEDVEMSS 313
A +ELA+L++ + + ++ A E ES+ VI KK + +Q ++K+NE++
Sbjct: 20 AEQELAKLQRQYRIMEGDRRAYGE--ESQNVI-------KKQRDTIQWLQKENEEL---M 67
Query: 314 DDENVVVDSEGGKKRVFNTKTLKD 385
D + ++ K NT TL +
Sbjct: 68 KDNRLAGSNQNQSKDNTNTSTLAE 91
>SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1296
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +2
Query: 5 PFTRLPSKARGVASKYFCF*NAMAKSIRSRWKRKCRAIK-RERYAVKELARLK---KMLG 172
P++ L + R + +KY+CF ++ SR KR+ RER+ ++ + + ++LG
Sbjct: 748 PYSSLLYQKRKMQTKYWCFGTKPLQNSFSRVKREMDGNPGRERHPRRQTLKFESFAQLLG 807
Query: 173 VKDEEKPAGSE 205
D+E+ SE
Sbjct: 808 SSDDEEGERSE 818
>SB_37688| Best HMM Match : Thioredoxin (HMM E-Value=5)
Length = 119
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Frame = +2
Query: 113 AIKRERYAVKELARLKK---MLGVKDEEKPAGSE-VMESEQV 226
A+K + A +ELA + K M+ V+D+E+P+GS+ V++ E V
Sbjct: 42 ALKPKFAASEELAEMSKKFVMVNVEDKEEPSGSQFVVDGEYV 83
>SB_52234| Best HMM Match : BRF1 (HMM E-Value=0.85)
Length = 371
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 164 MLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEDVEMSSDDE 322
M+G DE K A +E ++SE + L+A K+ + + +ED ++ DD+
Sbjct: 173 MIGTSDERK-AQTEEIQSEYLKSLEADRAKQQSPLASPPPQLSEDDHLNEDDQ 224
>SB_44868| Best HMM Match : Radial_spoke (HMM E-Value=0)
Length = 375
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 182 EEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEDVEMSSDDEN 325
EE P EV E + + LKK+++ + D EDV+ DD++
Sbjct: 328 EEYPTVPEVTEVDDPTVEEERALKKAQEEAMEAADDMEDVDDDDDDDD 375
>SB_22293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1239
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 251 KKSKKVLQDIEKDNEDVEMSSD-DENVVVDSE 343
K + K++ D + N+D E S+D DEN +VD E
Sbjct: 86 KDNGKIVSDDDNGNDDDEDSNDEDENGIVDHE 117
>SB_27494| Best HMM Match : MFAP1_C (HMM E-Value=0)
Length = 808
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +2
Query: 179 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIE---KDNEDVEMSSDDENVVVDSE 343
DEE+ E+ Q++ L A K+++K L D+E K E+ E S + DSE
Sbjct: 192 DEEEIDEEEIERRRQMLRLKAQQKKEAEKDLLDLEDEVKSEEEEEEESSEYEEYSDSE 249
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 27.9 bits (59), Expect = 7.6
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Frame = +2
Query: 116 IKRERYAVKELARLKKMLGVK---------DEEKPAGSEVMESEQVIFLDAGDLKKSKKV 268
IK+ A++E RLK+ L + D+ K G+ + E I DL ++
Sbjct: 2547 IKKLEIALEEERRLKENLKSQVNDYRKRGDDQSKDFGTRMNELYVEIENYRTDLADKDRI 2606
Query: 269 LQD-----IEKDNEDVEMSSDDENVVVDSEGGKKRV 361
++D ++ DNE ++ D N ++DSEG K +
Sbjct: 2607 IRDQKSRQVDMDNEINKLKRDLNNQIIDSEGHFKEL 2642
>SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 332 PQRFHHLNSFRRLHYP 285
P FHHLNS + +H+P
Sbjct: 132 PSGFHHLNSLKCIHWP 147
>SB_58709| Best HMM Match : CRA_rpt (HMM E-Value=1.3)
Length = 112
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Frame = +2
Query: 248 LKKSKKVLQDIEKD-NEDVEMSSDDENVVVDSE----GGKKRVFNTKTLKDQN 391
+ + KKVL + +K +ED +M S+DE VV + + G KK + + KT++ ++
Sbjct: 2 VSEDKKVLSEDKKVLSEDKKMVSEDEKVVSEDKKMVSGDKKVLSDYKTVQSED 54
>SB_17534| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.51)
Length = 976
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Frame = +2
Query: 113 AIKRERYAVKELARLKKML---GVKDEEKPAGSEVM--ESEQVIFLDAGDLKKSKKVLQD 277
A+ ++R +++L +L+KM GV EE A E + EQ + KK +K +D
Sbjct: 410 ALLKKRTTLRDL-QLRKMAREEGVSIEEIEAREEAAGGDEEQKEKMKERKDKKEEKKDKD 468
Query: 278 IEKDNEDVEMSSDDE 322
+KD ++ + SSD E
Sbjct: 469 KDKDKDEEDDSSDSE 483
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,337,139
Number of Sequences: 59808
Number of extensions: 285783
Number of successful extensions: 1092
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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