Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_N16
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070232-1|AAH70232.1| 129|Homo sapiens chromosome 12 open read... 62 2e-09
BC006002-1|AAH06002.1| 129|Homo sapiens chromosome 12 open read... 62 2e-09
AK091568-1|BAC03699.1| 129|Homo sapiens protein ( Homo sapiens ... 62 2e-09
BC107780-1|AAI07781.1| 129|Homo sapiens chromosome 12 open read... 62 2e-09
AB209999-1|BAE06081.1| 1731|Homo sapiens JARID1A variant protein... 36 0.095
S66431-1|AAB28544.1| 1722|Homo sapiens retinoblastoma binding pr... 33 0.67
BC028393-1|AAH28393.1| 947|Homo sapiens MYCBP associated protei... 33 0.89
AB083068-1|BAB88692.1| 947|Homo sapiens AMAP-1 protein. 33 0.89
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 33 1.2
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 33 1.2
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 33 1.2
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 33 1.2
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 33 1.2
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 33 1.2
Z22780-1|CAA80457.1| 598|Homo sapiens cylicin protein. 31 2.7
BC126461-1|AAI26462.1| 651|Homo sapiens cylicin, basic protein ... 31 2.7
BC070355-1|AAH70355.1| 433|Homo sapiens CYLC1 protein protein. 31 2.7
BC038787-1|AAH38787.1| 563|Homo sapiens CYLC1 protein protein. 31 2.7
AL627233-1|CAI40037.1| 651|Homo sapiens cylicin, basic protein ... 31 2.7
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 31 3.6
AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein. 31 3.6
BC105598-1|AAI05599.1| 259|Homo sapiens DDX46 protein protein. 30 8.3
BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 8.3
AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein. 30 8.3
>BC070232-1|AAH70232.1| 129|Homo sapiens chromosome 12 open reading
frame 31 protein.
Length = 129
Score = 62.1 bits (144), Expect = 2e-09
Identities = 48/115 (41%), Positives = 64/115 (55%)
Frame = +2
Query: 71 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL 250
MAKS+RS+WKRK RA KR++ A KE +RLK +L K G +M+ Q I A +
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNAPKEASRLKSIL------KLDGDVLMKDVQEI---ATVV 51
Query: 251 KKSKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 415
K Q EK +V+ DD + D KR N KTL DQ+GQYP+W++
Sbjct: 52 VPKPKHCQ--EKMQCEVKDEKDDMKMETDI----KR--NKKTLLDQHGQYPIWMN 98
>BC006002-1|AAH06002.1| 129|Homo sapiens chromosome 12 open reading
frame 31 protein.
Length = 129
Score = 62.1 bits (144), Expect = 2e-09
Identities = 48/115 (41%), Positives = 64/115 (55%)
Frame = +2
Query: 71 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL 250
MAKS+RS+WKRK RA KR++ A KE +RLK +L K G +M+ Q I A +
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNAPKEASRLKSIL------KLDGDVLMKDVQEI---ATVV 51
Query: 251 KKSKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 415
K Q EK +V+ DD + D KR N KTL DQ+GQYP+W++
Sbjct: 52 VPKPKHCQ--EKMQCEVKDEKDDMKMETDI----KR--NKKTLLDQHGQYPIWMN 98
>AK091568-1|BAC03699.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ34249 fis, clone FCBBF4000500. ).
Length = 129
Score = 62.1 bits (144), Expect = 2e-09
Identities = 48/115 (41%), Positives = 64/115 (55%)
Frame = +2
Query: 71 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL 250
MAKS+RS+WKRK RA KR++ A KE +RLK +L K G +M+ Q I A +
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNAPKEASRLKSIL------KLDGDVLMKDVQEI---ATVV 51
Query: 251 KKSKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 415
K Q EK +V+ DD + D KR N KTL DQ+GQYP+W++
Sbjct: 52 VPKPKHCQ--EKMQCEVKDEKDDMKMETDI----KR--NKKTLLDQHGQYPIWMN 98
>BC107780-1|AAI07781.1| 129|Homo sapiens chromosome 12 open reading
frame 31 protein.
Length = 129
Score = 61.7 bits (143), Expect = 2e-09
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Frame = +2
Query: 71 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL 250
MAKS+RS+WKRK RA KR++ A KE +RLK +L K G +M+ Q I
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNAPKEASRLKSIL------KLDGDVLMKDVQEIATVVVPK 54
Query: 251 KK--SKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 415
K +K+ +++ + +D++M +D + N KTL DQ+GQYP+W++
Sbjct: 55 PKHCQEKMQCEVKDEKDDMKMGTDIKR-------------NKKTLLDQHGQYPIWMN 98
>AB209999-1|BAE06081.1| 1731|Homo sapiens JARID1A variant protein
protein.
Length = 1731
Score = 36.3 bits (80), Expect = 0.095
Identities = 26/114 (22%), Positives = 50/114 (43%)
Frame = +2
Query: 74 AKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLK 253
+K ++ K + + +K KEL +L K L ++E K + ++ + ++ + K
Sbjct: 1565 SKELKKMDKPRKKKLKLGADKSKELNKLAKKLAKEEERKKKKEKAAAAKVELVKESTEKK 1624
Query: 254 KSKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 415
+ KKVL K + SDDEN V ++ ++ + +G W H
Sbjct: 1625 REKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCKDKVDWVQCDGGCDEWFH 1678
>S66431-1|AAB28544.1| 1722|Homo sapiens retinoblastoma binding protein
2 protein.
Length = 1722
Score = 33.5 bits (73), Expect = 0.67
Identities = 22/86 (25%), Positives = 41/86 (47%)
Frame = +2
Query: 74 AKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLK 253
+K ++ K + + +K K+L +L K L ++E K + ++ + ++ + K
Sbjct: 1529 SKELKKMDKPRKKKLKLGADKSKKLNKLAKKLAKEEERKKKKEKAAAAKVELVKESTEKK 1588
Query: 254 KSKKVLQDIEKDNEDVEMSSDDENVV 331
+ KKVL K + SDDEN V
Sbjct: 1589 REKKVLDIPSKYDWSGAEESDDENAV 1614
>BC028393-1|AAH28393.1| 947|Homo sapiens MYCBP associated protein
protein.
Length = 947
Score = 33.1 bits (72), Expect = 0.89
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 110 RAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKD 289
+A K ER K A+ KK LG+KD+E G++++ E K KKV++ +D
Sbjct: 824 KAGKEER---KGAAQEKKQLGIKDKEDKKGAKLLGKEDRPNSKKHKAKDDKKVIKSASQD 880
Query: 290 NEDVEMSSDD 319
+E + D
Sbjct: 881 RFSLEDPTPD 890
>AB083068-1|BAB88692.1| 947|Homo sapiens AMAP-1 protein.
Length = 947
Score = 33.1 bits (72), Expect = 0.89
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 110 RAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKD 289
+A K ER K A+ KK LG+KD+E G++++ E K KKV++ +D
Sbjct: 824 KAGKEER---KGAAQEKKQLGIKDKEDKKGAKLLGKEDRPNSKKHKAKDDKKVIKSASQD 880
Query: 290 NEDVEMSSDD 319
+E + D
Sbjct: 881 RFSLEDPTPD 890
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +2
Query: 242 GDLKKSKKVLQDIEKDNEDVEMSSDDEN------VVVDSEGGKK 355
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +2
Query: 242 GDLKKSKKVLQDIEKDNEDVEMSSDDEN------VVVDSEGGKK 355
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +2
Query: 242 GDLKKSKKVLQDIEKDNEDVEMSSDDEN------VVVDSEGGKK 355
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +2
Query: 242 GDLKKSKKVLQDIEKDNEDVEMSSDDEN------VVVDSEGGKK 355
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +2
Query: 242 GDLKKSKKVLQDIEKDNEDVEMSSDDEN------VVVDSEGGKK 355
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +2
Query: 242 GDLKKSKKVLQDIEKDNEDVEMSSDDEN------VVVDSEGGKK 355
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>Z22780-1|CAA80457.1| 598|Homo sapiens cylicin protein.
Length = 598
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 236 DAGDLKK-SKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 388
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 249 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 298
>BC126461-1|AAI26462.1| 651|Homo sapiens cylicin, basic protein of
sperm head cytoskeleton 1 protein.
Length = 651
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 236 DAGDLKK-SKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 388
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 302 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 351
>BC070355-1|AAH70355.1| 433|Homo sapiens CYLC1 protein protein.
Length = 433
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 236 DAGDLKK-SKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 388
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 301 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 350
>BC038787-1|AAH38787.1| 563|Homo sapiens CYLC1 protein protein.
Length = 563
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 236 DAGDLKK-SKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 388
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 208 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 257
>AL627233-1|CAI40037.1| 651|Homo sapiens cylicin, basic protein of
sperm head cytoskeleton protein.
Length = 651
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 236 DAGDLKK-SKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 388
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 302 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 351
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 242 GDLKKSKKVLQDIEKDNEDVEMSSDDEN 325
GD KK +++E+D+ED EMS D+E+
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEED 39
>AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein.
Length = 1031
Score = 31.1 bits (67), Expect = 3.6
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +2
Query: 86 RSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKK 265
RSR +R+ R+ R R + R + + K A + E+ + GD K KK
Sbjct: 78 RSRERRRSRSRDRRRSRSRSRGRRSRSSSPGSKSKKAENRSRSKEKA---EGGDSSKEKK 134
Query: 266 VLQDIEKDNEDVEMSSDDEN 325
+D ++D ++ + + D+N
Sbjct: 135 KDKDDKEDEKEKDAGNFDQN 154
>BC105598-1|AAI05599.1| 259|Homo sapiens DDX46 protein protein.
Length = 259
Score = 29.9 bits (64), Expect = 8.3
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +2
Query: 86 RSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKK 265
RSR +R+ R+ R R + R + ++ K + E+ D G+ K KK
Sbjct: 78 RSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKT---DGGESSKEKK 134
Query: 266 VLQDIEKDNEDVEMSSDDEN 325
+D ++D ++ + + D+N
Sbjct: 135 KDKDDKEDEKEKDAGNFDQN 154
>BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46 protein.
Length = 1031
Score = 29.9 bits (64), Expect = 8.3
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +2
Query: 86 RSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKK 265
RSR +R+ R+ R R + R + ++ K + E+ D G+ K KK
Sbjct: 78 RSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKT---DGGESSKEKK 134
Query: 266 VLQDIEKDNEDVEMSSDDEN 325
+D ++D ++ + + D+N
Sbjct: 135 KDKDDKEDEKEKDAGNFDQN 154
>AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein.
Length = 1058
Score = 29.9 bits (64), Expect = 8.3
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +2
Query: 86 RSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKK 265
RSR +R+ R+ R R + R + ++ K + E+ D G+ K KK
Sbjct: 104 RSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKT---DGGESSKEKK 160
Query: 266 VLQDIEKDNEDVEMSSDDEN 325
+D ++D ++ + + D+N
Sbjct: 161 KDKDDKEDEKEKDAGNFDQN 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,184,766
Number of Sequences: 237096
Number of extensions: 1246772
Number of successful extensions: 4022
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3987
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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