Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_N16
(653 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g06420.1 68414.m00679 expressed protein ; expression supporte... 33 0.22
At1g33040.1 68414.m04068 nascent polypeptide-associated complex ... 32 0.29
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 32 0.38
At4g33500.1 68417.m04758 protein phosphatase 2C-related / PP2C-r... 31 0.67
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 31 0.67
At2g30575.1 68415.m03725 glycosyl transferase family 8 protein c... 31 0.88
At1g63980.1 68414.m07247 D111/G-patch domain-containing protein ... 30 1.2
At5g33220.1 68418.m03924 hypothetical protein contains Pfam prof... 30 1.5
At3g58840.1 68416.m06558 expressed protein 30 1.5
At1g75010.1 68414.m08709 MORN (Membrane Occupation and Recogniti... 29 2.0
At4g24100.1 68417.m03460 protein kinase family protein contains ... 29 2.7
At2g22795.1 68415.m02704 expressed protein 29 2.7
At2g03140.1 68415.m00267 CAAX amino terminal protease family pro... 29 2.7
At1g11510.1 68414.m01322 DNA-binding storekeeper protein-related... 29 2.7
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 3.6
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 28 4.7
At3g52860.1 68416.m05825 expressed protein 28 4.7
At3g24340.1 68416.m03056 SNF2 domain-containing protein / helica... 28 4.7
At3g14900.1 68416.m01884 expressed protein 28 4.7
At2g43690.1 68415.m05431 lectin protein kinase, putative similar... 28 4.7
At1g52980.1 68414.m05995 GTP-binding family protein contains Pfa... 28 4.7
At5g57120.1 68418.m07132 expressed protein weak similarity to SP... 28 6.2
At5g36250.1 68418.m04373 protein phosphatase 2C, putative / PP2C... 28 6.2
At1g68440.1 68414.m07818 expressed protein 28 6.2
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 28 6.2
At4g14200.1 68417.m02191 expressed protein 27 8.2
At2g18876.2 68415.m02202 expressed protein 27 8.2
At2g18876.1 68415.m02201 expressed protein 27 8.2
>At1g06420.1 68414.m00679 expressed protein ; expression supported
by MPSS
Length = 221
Score = 32.7 bits (71), Expect = 0.22
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 89 SRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 268
+RWKR +K+E V + K GV EK + V E+ + +F G+ +K+V
Sbjct: 95 NRWKRDQVCVKKEEIKVSGIVSNKDEDGVDSREKKKKNPVKENTRRVFKSKGE-NAAKEV 153
Query: 269 LQD-IEKDNEDVEMSSD 316
Q I+K E+ +S+
Sbjct: 154 TQCWIKKKVEEERETSE 170
>At1g33040.1 68414.m04068 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 209
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 251 KKSKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLK 382
K+ V++D+ KD E+ + DDE+V V+ EGG + +++ K
Sbjct: 24 KEDDVVVEDV-KDGEEEDDDEDDEDVEVEGEGGNENAKQSRSEK 66
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 31.9 bits (69), Expect = 0.38
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Frame = +2
Query: 98 KRKCRAIKRERYAVKELARL----KKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKK 265
K++ ++ ++ + +E A L KK +G + + K A E E + + LK+ +
Sbjct: 175 KKEYEGLEEKKASAEEKAALIYQKKKTIGNEKKLKKAQKEEAEKHLRLQEELKALKRERF 234
Query: 266 VLQ------DIEKDNEDVEMSSDDENVVV------DSEGGKKRVFNTKTLKD 385
+ Q DIEK NEDV+ + V+ + E GK++V K LK+
Sbjct: 235 LWQLYNIENDIEKANEDVDSEKSNRKDVMRELEKFEREAGKRKVEQAKYLKE 286
>At4g33500.1 68417.m04758 protein phosphatase 2C-related /
PP2C-related YHR077c (NMD2,IFS1) protein -Saccharomyces
cerevisiae,PID:g555939
Length = 724
Score = 31.1 bits (67), Expect = 0.67
Identities = 27/93 (29%), Positives = 44/93 (47%)
Frame = +2
Query: 128 RYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEDVEM 307
R++V E+A+ K + E+ P + V E E V +K V D+E D E+V
Sbjct: 367 RHSVDEIAQ--KPIIDTSEKNPMETFV-EPEAVHSSVDESTEKLVVVTSDVENDGENVAS 423
Query: 308 SSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 406
+++DE V D+ + N K ++ Q PV
Sbjct: 424 TTEDEITVRDTITDSGSISNNDDTKVEDLQLPV 456
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 1102
Score = 31.1 bits (67), Expect = 0.67
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 239 AGDLKKSKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQY 400
AGD + + E D++D + DDE+V + ++ V N K +G Y
Sbjct: 58 AGDSDSDSDISDEEEDDDDDEDNDDDDEDVEEGKKASEENVVNGDGEKKADGNY 111
>At2g30575.1 68415.m03725 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 610
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 236 DAGDLKKSKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 391
D LK+ K++LQD + ++ + SSD N V S G ++ F ++ K N
Sbjct: 65 DEEGLKEPKRILQDRDFNSVVLSNSSDKSNDTVQSNEGDQKNFLSEVDKGNN 116
>At1g63980.1 68414.m07247 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 391
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 158 KKMLGVKDEEKPAGSEVMESEQVIF--LDAGDLKKSKKVLQDIEKDNEDVEMSSDDENVV 331
K+ LG+KD K E ++ F D D +D E+D ++ E DD++ V
Sbjct: 239 KQGLGIKDRPKKIAGVRYEGKKTSFDNSDDDDDDDDDDDEEDEEEDEDESEADDDDKDSV 298
Query: 332 VDSEGGKKR 358
++S KR
Sbjct: 299 IESSLPAKR 307
>At5g33220.1 68418.m03924 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 587
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 179 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEDVEMSSDDEN 325
+EEK + V++ + D GD + +QD + DN M DD+N
Sbjct: 138 EEEKETTNAVVQHDDAANKDDGDDDNLSQNMQDGDDDNLPQNMQDDDDN 186
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 29.9 bits (64), Expect = 1.5
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Frame = +2
Query: 140 KELARLKKMLGVKDEEKPAGSEVMESEQVIFLD----AGDLKK--SKK-----VLQDIEK 286
K+L ++M + DE+K E+ ++ V+ L+ +LKK SKK L + +K
Sbjct: 178 KKLRSEEEMREIDDEKKREIEELQKTVIVLNLELVKNVEELKKWKSKKKLTEEALSETQK 237
Query: 287 DNEDVEMSSDDENVVVDSEGGKKRVF--NTKTLKDQNG 394
+++E+ D+ ++ E G K VF N +T+K NG
Sbjct: 238 REKELELKKDE--LLKKVEEGNKTVFALNERTMKPSNG 273
>At1g75010.1 68414.m08709 MORN (Membrane Occupation and Recognition
Nexus) repeat-containing protein
/phosphatidylinositol-4-phosphate 5-kinase-related low
similarity to phosphatidylinositol-4-phosphate 5-kinase
AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains
Pfam profile PF02493: MORN repeat
Length = 712
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 236 DAGDLKKSKKVLQDIEKDNED-VEMSSDDENVVVDSEGGKKRVFNTKTLKDQNG 394
D+ D+K S + +++ E D+ED +E+S + ++ + G+ + LKD+NG
Sbjct: 378 DSTDVKTSNQNIEEFEIDSEDLLEVSENGDDSEYPLKEGEPSRNSRLDLKDENG 431
>At4g24100.1 68417.m03460 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 709
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +2
Query: 161 KMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEDVEMSSDDENVV--- 331
K + DEE + SE D DLK +L D++D+E S +DE ++
Sbjct: 332 KRMATADEEAISQSEYQRGVSAWNFDVRDLKTQASLL----IDDDDLEESKEDEEILCAQ 387
Query: 332 VDSEGGKKRVFNTKTL-KDQNGQYPV 406
+ +++VF++ L ++ NG+ V
Sbjct: 388 FNKVNDREQVFDSLQLYENMNGKEKV 413
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.1 bits (62), Expect = 2.7
Identities = 25/97 (25%), Positives = 50/97 (51%)
Frame = +2
Query: 116 IKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNE 295
I++E A +E + +K K++E+ + +E E+ + +K ++V ++ +K +E
Sbjct: 604 IEKEESASQEETK-EKETETKEKEESSSNESQENVNT------ESEKKEQVEENEKKTDE 656
Query: 296 DVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 406
D SS EN V D+E + + K ++NG+ V
Sbjct: 657 DTSESSK-ENSVSDTEQKQSEETSEKEESNKNGETEV 692
>At2g03140.1 68415.m00267 CAAX amino terminal protease family protein
very low similarity to SP|Q40863 Late embryogenesis
abundant protein EMB8 from Picea glauca; contains Pfam
profile PF02517 CAAX amino terminal protease family
protein
Length = 1805
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 155 LKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNED 298
L+ M+ DEEK G+EV S++ D +LK +K V ++ +E+
Sbjct: 966 LENMISQLDEEKKEGNEV--SDEKNLKDEKNLKDAKNVTNEVVSPSEE 1011
>At1g11510.1 68414.m01322 DNA-binding storekeeper protein-related
similar to storekeeper protein GI:14268476 [Solanum
tuberosum]
Length = 352
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 179 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKK 355
DEE + SE+ + + + + D+K++KKV + EK + D+ V +D + KK
Sbjct: 59 DEETDSDSELEKKKDQVVTNPVDVKRAKKV-KTSEKSGAKRSLEVDEAAVSMDVKRAKK 116
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +2
Query: 167 LGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEDVEMSSDDENVVVDSEG 346
+G K EKP E+ S + L + L D+E D E+ E D + E
Sbjct: 39 IGTKLCEKPKAEEIDFSARKKKLKSKKGGSVSFALLDVEDDKEEAEDGDDKNPSIRSDEV 98
Query: 347 GKKRVFNTKTLKDQNGQYPV 406
+ + K KD++G++ V
Sbjct: 99 VGETSMSKKKKKDKSGKHGV 118
>At4g02510.1 68417.m00343 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1503
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 212 ESEQVIFLDAGDLKKSKKVLQDIEKDNEDVEMSSDDENV 328
E+E++IF G + +K+ L ++EK + +E SD+ N+
Sbjct: 635 ETEEMIF---GSSEAAKQFLAELEKASSGIEAHSDEANI 670
>At3g52860.1 68416.m05825 expressed protein
Length = 156
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 116 IKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNE 295
+KRE A LKK + V +EE E+++ +F ++ K V + IEK +
Sbjct: 97 LKREDRAPSRAESLKKDIAVMEEELKTKDELIKKHMRLFQES-----QKLVKEQIEKHRD 151
Query: 296 DVE 304
++E
Sbjct: 152 ELE 154
>At3g24340.1 68416.m03056 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|P41410 DNA
repair protein rhp54 (RAD54 homolog)
{Schizosaccharomyces pombe}; contains PFam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1132
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 167 LGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEDVEMSSDDENVVVDSEG 346
LG E+ +G + E + DA D S V + D+ DVE S D D EG
Sbjct: 253 LGTDSREEVSGEDRDSGESDMDEDANDSDSSDYVGES--SDSSDVESSDSDFVCSEDEEG 310
Query: 347 GKK 355
G +
Sbjct: 311 GTR 313
>At3g14900.1 68416.m01884 expressed protein
Length = 611
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 275 DIEKDNEDVEMSSDDENVVVDSEG 346
D + D+ +VE DD+N+VVD EG
Sbjct: 447 DDDDDDGEVEEVDDDDNMVVDVEG 470
>At2g43690.1 68415.m05431 lectin protein kinase, putative similar to
receptor-like kinase LECRK1 [Arabidopsis thaliana]
gi|2150023|gb|AAB58725
Length = 664
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 227 IFLDAGDLKKSKKVLQ---DIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQ 397
IF D D S ++ DI KD+E ++ DD +V ++ G + V DQNGQ
Sbjct: 114 IFNDTNDGNSSNHIIAVELDIHKDDEFGDI--DDNHVGININGMRSIVSAPAGYYDQNGQ 171
Query: 398 Y 400
+
Sbjct: 172 F 172
>At1g52980.1 68414.m05995 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 576
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 149 ARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEDVEMSSDDENV 328
A LK + G+ ++ V F D DLK KK + E D E+ + +DE+
Sbjct: 491 AALKAIAGIMSTQQQKDVPVQRD----FYDEKDLKDDKKAKESTETDAENGTDAEEDEDA 546
Query: 329 VVDSEGG 349
V SE G
Sbjct: 547 V--SEDG 551
>At5g57120.1 68418.m07132 expressed protein weak similarity to
SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens}
Length = 330
Score = 27.9 bits (59), Expect = 6.2
Identities = 28/110 (25%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Frame = +2
Query: 83 IRSRWKRKCRAIK-RERYAVKELARLKKMLGVKDEEKPAG-SEVMESEQVIFLDAGDLKK 256
++ + K+K +K E VKE + + GVK+++K S+ +E++ + K+
Sbjct: 121 VKEKKKKKETKVKVTEEEKVKETDAVIED-GVKEKKKKKSKSKSVEADDDKEKVSKKRKR 179
Query: 257 SK--KVLQDIEKDNEDVEMSSDDENVVVDSEGGKKR-VFNTKTLKDQNGQ 397
S+ + ++ E D+E+ + +ENVV + EG ++ V T+T ++ N +
Sbjct: 180 SEPEETKEETEDDDEESKRRKKEENVVENDEGVQETPVKETETKENGNAE 229
>At5g36250.1 68418.m04373 protein phosphatase 2C, putative / PP2C,
putative
Length = 448
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 260 KKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 391
++VL++I + +D ++S D +V S G+ RV+N +KDQ+
Sbjct: 135 EEVLKEISLNTDDRKISED---LVHISANGESRVYNKDYVKDQD 175
>At1g68440.1 68414.m07818 expressed protein
Length = 306
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 245 DLKKSKKVLQDIEKDNEDVEMSSDDENVVVDSEGGKKRV 361
D+ S V D EKD ED +DDE+ VDS ++RV
Sbjct: 92 DVSCSSTVSSDDEKDEED---EADDEDEDVDSIFNRRRV 127
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 27.9 bits (59), Expect = 6.2
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 143 ELARLKKMLGVKDE-EKPAGSEVMES-EQVIFLDAGDLKKSKKVLQDIEKDNEDVEMSSD 316
EL RLK +LG K+E E G+E++ + I L G+L+K +L+ K+ E +
Sbjct: 207 ELGRLKALLGSKEEKEAIEGNEIVSKLKSEIELLRGELEK-VSILESSLKEQEGLV---- 261
Query: 317 DENVVVDSEGGK 352
E + VD E K
Sbjct: 262 -EQLKVDLEAAK 272
>At4g14200.1 68417.m02191 expressed protein
Length = 784
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +2
Query: 167 LGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIE-KDNEDVEMSS-DDENVVVDS 340
LG+K E GSEV S++++ D + + ++ E E++ +S + E++ + +
Sbjct: 355 LGIKPEGLSIGSEVSSSDKLLAGDKTEPQGQTDLVAVKEFPSAENILISKINSEDIGMKA 414
Query: 341 EGGKKRVFNTKTLKDQ 388
E GK + N +T++ +
Sbjct: 415 EEGKSSLGNAQTVESE 430
>At2g18876.2 68415.m02202 expressed protein
Length = 284
Score = 27.5 bits (58), Expect = 8.2
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +2
Query: 119 KRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL--KKS-----KKVLQD 277
K+E+ +K RL ++L K +E +G E+M Q G KK+ KK++
Sbjct: 70 KKEKEYIKLQERLNQVLMEKKKETRSGMEIMNLLQKEGRQRGTWSGKKTDSDFYKKIVDA 129
Query: 278 IEKDNEDVEMSSDDENVVVDSEGGKKRVF 364
E N+++ + D ++ S G R F
Sbjct: 130 YEAKNQELMAENTDLRALLRSTQGDMRSF 158
>At2g18876.1 68415.m02201 expressed protein
Length = 382
Score = 27.5 bits (58), Expect = 8.2
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +2
Query: 119 KRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL--KKS-----KKVLQD 277
K+E+ +K RL ++L K +E +G E+M Q G KK+ KK++
Sbjct: 168 KKEKEYIKLQERLNQVLMEKKKETRSGMEIMNLLQKEGRQRGTWSGKKTDSDFYKKIVDA 227
Query: 278 IEKDNEDVEMSSDDENVVVDSEGGKKRVF 364
E N+++ + D ++ S G R F
Sbjct: 228 YEAKNQELMAENTDLRALLRSTQGDMRSF 256
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,638,382
Number of Sequences: 28952
Number of extensions: 209292
Number of successful extensions: 930
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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