Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_N15
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    29   0.13 
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   4.9  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    24   4.9  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 29.1 bits (62), Expect = 0.13
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +2

Query: 8    T*YHNINEPLINVGASDASE 67
            T YHNIN+P++ + A+DA +
Sbjct: 1181 TEYHNINDPIVKLRATDADD 1200


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 180 VEIGFNDFGLRWND 139
           + + +ND+ LRWND
Sbjct: 76  LSLEWNDYNLRWND 89


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 180 VEIGFNDFGLRWND 139
           + + +ND+ LRWND
Sbjct: 76  LNLEWNDYNLRWND 89


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,011
Number of Sequences: 2352
Number of extensions: 7441
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)