Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_N15
         (664 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei...    31   0.96 
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical...    28   5.1  

>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
           protein.
          Length = 2427

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +1

Query: 259 QAYKNADDEYKSIQNKLDDIVKSTGGQIVYNG 354
           Q + N + E K+ +N+LDDI +STG QI+ +G
Sbjct: 629 QKHINFEQELKANENRLDDI-RSTGEQIIDSG 659


>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
            W04A8.7 protein.
          Length = 1792

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 268  KNADDEYKSIQNKLDDIVKSTGGQIVYNGDQFTAYQLLGKQ 390
            K+   EYKSI   L D  K     +V+NG + + Y L  K+
Sbjct: 1631 KSKSQEYKSIDEFLKDAEKIYTNSVVFNGAE-SVYSLKAKE 1670


>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
            protein W04A8.7 protein.
          Length = 1792

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 268  KNADDEYKSIQNKLDDIVKSTGGQIVYNGDQFTAYQLLGKQ 390
            K+   EYKSI   L D  K     +V+NG + + Y L  K+
Sbjct: 1631 KSKSQEYKSIDEFLKDAEKIYTNSVVFNGAE-SVYSLKAKE 1670


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,689,904
Number of Sequences: 27780
Number of extensions: 185580
Number of successful extensions: 408
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)