Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_N14
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 245 KWYPRNITQRLHVHMVTGXSESDAQNKMRENF 340
           K+ P +I QRL  H+V   +  D +  + + F
Sbjct: 655 KFVPEHIDQRLCTHVVYAFASLDPEKLLLKEF 686


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 115 NKTREN*RFILNNYYILCRYYY 50
           NK  +    I +N YILCR +Y
Sbjct: 217 NKQDDKIPQISDNLYILCRLHY 238


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 115 NKTREN*RFILNNYYILCRYYY 50
           NK  +    I +N YILCR +Y
Sbjct: 217 NKQDDKIPQISDNLYILCRLHY 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,860
Number of Sequences: 336
Number of extensions: 2673
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)