Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_N14
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28682| Best HMM Match : Hydrolase (HMM E-Value=1.2e-19) 54 1e-07
SB_18334| Best HMM Match : CSE2 (HMM E-Value=4.9) 31 0.82
SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_1419| Best HMM Match : CSE2 (HMM E-Value=6.1) 30 1.9
SB_10954| Best HMM Match : Activin_recp (HMM E-Value=0.12) 29 4.4
SB_57924| Best HMM Match : PG_binding_1 (HMM E-Value=3.5) 29 4.4
SB_45911| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_5938| Best HMM Match : Activin_recp (HMM E-Value=0.28) 29 4.4
SB_3171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_2279| Best HMM Match : PG_binding_1 (HMM E-Value=3.5) 29 4.4
SB_36035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
>SB_28682| Best HMM Match : Hydrolase (HMM E-Value=1.2e-19)
Length = 219
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +2
Query: 302 SESDAQNKMRENFKMMWEQHPNFG-RNSILWEEWWRQVVKLTLQDHLPVGADTRSLGNTL 478
S ++ + R+ +KM W ++PNFG + I ++WW +VV+ T ++ + + L
Sbjct: 37 SAANIDKEFRKAYKMYWIKYPNFGAAHRITSKQWWGKVVRKTFDGNIH-SEEIEAFSVHL 95
Query: 479 INDFKTSKCWDVXAGSDTLLXIIKXXGIAIXVIFEFRPXXXXXXXXXXXXKYFDFILT 652
N F T W+V +L +K + + VI F ++F FILT
Sbjct: 96 YNHFATGDPWEVFPEVMHVLTQLKGEEVTLGVISNFDERLEQILDSLKLREFFSFILT 153
>SB_18334| Best HMM Match : CSE2 (HMM E-Value=4.9)
Length = 296
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 395 EWWRQVVKLTLQ--DHLPVGADTRSLGNTLINDFKTSKCWDVXAGSDTLLXI 544
EWWR + L+ + V D +SL +ND+ + CWD TL+ +
Sbjct: 76 EWWRHIDNLSQRRRSSAKVSLDEQSLVE--LNDYFANLCWDTAYEQPTLVEV 125
>SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 395 EWWRQVVKLTLQ--DHLPVGADTRSLGNTLINDFKTSKCWDVXAGSDTLLXI 544
EWWR + L+ + V D +SL +ND+ + CWD TL+ +
Sbjct: 110 EWWRHIDNLSQRRRSSAKVSLDEQSLVE--LNDYFANLCWDTAYEQPTLVEV 159
>SB_1419| Best HMM Match : CSE2 (HMM E-Value=6.1)
Length = 270
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 395 EWWRQVVKLTLQ--DHLPVGADTRSLGNTLINDFKTSKCWDVXAGSDTLLXI 544
+WWR + L+ + V D +SL +ND+ + CWD TL+ +
Sbjct: 50 DWWRHIDNLSQRRRSSAKVSLDEQSLVE--LNDYFANLCWDTAYEQPTLVEV 99
>SB_10954| Best HMM Match : Activin_recp (HMM E-Value=0.12)
Length = 167
Score = 28.7 bits (61), Expect = 4.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 353 EQHPNFGRNSILWEEWWRQ 409
+QHPN + SI ++ WW +
Sbjct: 94 QQHPNLDKESIAYKTWWAE 112
>SB_57924| Best HMM Match : PG_binding_1 (HMM E-Value=3.5)
Length = 581
Score = 28.7 bits (61), Expect = 4.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 353 EQHPNFGRNSILWEEWWRQ 409
+QHPN + SI ++ WW +
Sbjct: 250 QQHPNLDKESIAYKTWWAE 268
>SB_45911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 28.7 bits (61), Expect = 4.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 353 EQHPNFGRNSILWEEWWRQ 409
+QHPN + SI ++ WW +
Sbjct: 89 QQHPNLDKESIAYKTWWAE 107
>SB_5938| Best HMM Match : Activin_recp (HMM E-Value=0.28)
Length = 287
Score = 28.7 bits (61), Expect = 4.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 353 EQHPNFGRNSILWEEWWRQ 409
+QHPN + SI ++ WW +
Sbjct: 89 QQHPNLDKESIAYKTWWAE 107
>SB_3171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 851
Score = 28.7 bits (61), Expect = 4.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 353 EQHPNFGRNSILWEEWWRQ 409
+QHPN + SI ++ WW +
Sbjct: 737 QQHPNLDKESIAYKTWWAE 755
>SB_2279| Best HMM Match : PG_binding_1 (HMM E-Value=3.5)
Length = 351
Score = 28.7 bits (61), Expect = 4.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 353 EQHPNFGRNSILWEEWWRQ 409
+QHPN + SI ++ WW +
Sbjct: 20 QQHPNLDKESIAYKTWWAE 38
>SB_36035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 28.3 bits (60), Expect = 5.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 353 EQHPNFGRNSILWEEWWRQ 409
+QHPN + SI ++ WW +
Sbjct: 141 QQHPNLDKESIAFKTWWAE 159
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,901,785
Number of Sequences: 59808
Number of extensions: 316893
Number of successful extensions: 604
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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