Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_N13
         (423 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   2.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   2.1  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   2.8  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   2.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   3.7  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   4.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    20   8.6  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 123 SLSVSSHHLN*TSQCHCLVVKCTG 52
           S SV  +++  TS   C+++ C G
Sbjct: 59  SSSVFPNYIRTTSMVFCIIIMCLG 82


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 123 SLSVSSHHLN*TSQCHCLVVKCTG 52
           S SV  +++  TS   C+++ C G
Sbjct: 59  SSSVFPNYIRTTSMVFCIIIMCLG 82


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +1

Query: 106 RAHRQRHESSKGAPHNDRVRSSSPTAARVRM-RSLH 210
           R+H    E  KGA +  R R++  ++  V + R  H
Sbjct: 70  RSHEPEMERPKGASNGKRARTAYTSSQLVELEREFH 105


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +1

Query: 106 RAHRQRHESSKGAPHNDRVRSSSPTAARVRM-RSLH 210
           R+H    E  KGA +  R R++  ++  V + R  H
Sbjct: 90  RSHEPEMERPKGASNGKRARTAYTSSQLVELEREFH 125


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -1

Query: 321 LFFTCQAWLIRFYNMQLH 268
           LFF    W+  F N  LH
Sbjct: 138 LFFVILLWISFFLNFMLH 155


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 239 TSMXRSPLVRCKERIRTLA 183
           T   R    RCKE++ TLA
Sbjct: 4   TGADRLMTQRCKEKLNTLA 22


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 2   STLGGFGPLTLPARAKDPVHFTTKQW 79
           S + G  PL       + +HFT K W
Sbjct: 35  SQIVGVFPLNHLNEEPEKLHFTFKSW 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,657
Number of Sequences: 336
Number of extensions: 2186
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)