Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_N11
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051876-1|AAK93300.1|  395|Drosophila melanogaster LD37002p pro...    71   2e-12
AE014297-3579|AAF56317.1|  395|Drosophila melanogaster CG13626-P...    71   2e-12
BT024288-1|ABC86350.1|  562|Drosophila melanogaster IP13637p pro...    35   0.075
AE014134-2892|AAF53639.2|  535|Drosophila melanogaster CG5681-PA...    35   0.075

>AY051876-1|AAK93300.1|  395|Drosophila melanogaster LD37002p
           protein.
          Length = 395

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 39/133 (29%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
 Frame = +2

Query: 203 KNAFMATAKDICSQITKLRDFLLEHRDKYLSFFNNV-TGDDMSDEERDQIDTGAQRIMNT 379
           K+ F   AK++C++IT LR+ L+E+R  Y+    ++ +   M+D +RD ID  +++ +  
Sbjct: 41  KDDFAKQAKEVCNKITSLRNVLIENRTAYMRIGQHLKSAAHMTDAQRDLIDRESEKFVTF 100

Query: 380 CSHLLKEFXNDNRRTTVTPQTXEYMDSXVDLIDAYLKAVCKVHSELKAMXVKRALHMXKL 559
            +  L +  +D +     PQ  +++D+ +DL+ +YL +V +++ + K   V+  L   +L
Sbjct: 101 YTQHLAKMRSDWKSAKRKPQERQHIDAVLDLLVSYLHSVEQIYLDQKKYRVQHELETYRL 160

Query: 560 SXLELPATKSSIP 598
             L+L A K  IP
Sbjct: 161 --LKLAADKKKIP 171


>AE014297-3579|AAF56317.1|  395|Drosophila melanogaster CG13626-PA
           protein.
          Length = 395

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 39/133 (29%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
 Frame = +2

Query: 203 KNAFMATAKDICSQITKLRDFLLEHRDKYLSFFNNV-TGDDMSDEERDQIDTGAQRIMNT 379
           K+ F   AK++C++IT LR+ L+E+R  Y+    ++ +   M+D +RD ID  +++ +  
Sbjct: 41  KDDFAKQAKEVCNKITSLRNVLIENRTAYMRIGQHLKSAAHMTDAQRDLIDRESEKFVTF 100

Query: 380 CSHLLKEFXNDNRRTTVTPQTXEYMDSXVDLIDAYLKAVCKVHSELKAMXVKRALHMXKL 559
            +  L +  +D +     PQ  +++D+ +DL+ +YL +V +++ + K   V+  L   +L
Sbjct: 101 YTQHLAKMRSDWKSAKRKPQERQHIDAVLDLLVSYLHSVEQIYLDQKKYRVQHELETYRL 160

Query: 560 SXLELPATKSSIP 598
             L+L A K  IP
Sbjct: 161 --LKLAADKKKIP 171


>BT024288-1|ABC86350.1|  562|Drosophila melanogaster IP13637p
           protein.
          Length = 562

 Score = 35.1 bits (77), Expect = 0.075
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
 Frame = +2

Query: 206 NAFMATAKDICSQITKLRDFLLEHRDKYLSFFNNVTGDDMSDEERDQIDTGAQRI--MNT 379
           NAFM  A++  + I  L D +L+   K +SF + V  D + D  R +ID   +R+   N 
Sbjct: 222 NAFMLKAEEDSALIKNLTDEVLDMLSKLISFNSEVLTDTIVDGIRKEIDELLERLGEGNN 281

Query: 380 CSHLLKEFXNDNRRTTVTPQ 439
            +   K +   N+RT  +P+
Sbjct: 282 TAETAK-YPTSNQRTGNSPK 300


>AE014134-2892|AAF53639.2|  535|Drosophila melanogaster CG5681-PA
           protein.
          Length = 535

 Score = 35.1 bits (77), Expect = 0.075
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
 Frame = +2

Query: 206 NAFMATAKDICSQITKLRDFLLEHRDKYLSFFNNVTGDDMSDEERDQIDTGAQRI--MNT 379
           NAFM  A++  + I  L D +L+   K +SF + V  D + D  R +ID   +R+   N 
Sbjct: 195 NAFMLKAEEDSALIKNLTDEVLDMLSKLISFNSEVLTDTIVDGIRKEIDELLERLGEGNN 254

Query: 380 CSHLLKEFXNDNRRTTVTPQ 439
            +   K +   N+RT  +P+
Sbjct: 255 TAETAK-YPTSNQRTGNSPK 273


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,101,926
Number of Sequences: 53049
Number of extensions: 389608
Number of successful extensions: 1003
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)