Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_N10
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23683| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_32124| Best HMM Match : K-box (HMM E-Value=4.1) 33 0.20
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 33 0.20
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 33 0.27
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 32 0.47
SB_17326| Best HMM Match : DUF1127 (HMM E-Value=0.71) 31 0.62
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 31 0.62
SB_23024| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 31 0.81
SB_35717| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_2494| Best HMM Match : M (HMM E-Value=0.0056) 30 1.4
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 30 1.9
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 30 1.9
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 30 1.9
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_45474| Best HMM Match : PilO (HMM E-Value=1.9) 29 3.3
SB_43555| Best HMM Match : Shugoshin_N (HMM E-Value=2.7) 29 3.3
SB_36254| Best HMM Match : Filament (HMM E-Value=0.21) 29 3.3
SB_23221| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_56379| Best HMM Match : Shugoshin_N (HMM E-Value=2.7) 29 3.3
SB_56085| Best HMM Match : Shugoshin_N (HMM E-Value=2.7) 29 3.3
SB_53647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_50205| Best HMM Match : Shugoshin_N (HMM E-Value=2.7) 29 3.3
SB_37800| Best HMM Match : Shugoshin_N (HMM E-Value=2.7) 29 3.3
SB_32928| Best HMM Match : PilO (HMM E-Value=1.9) 29 3.3
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 29 3.3
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023) 29 3.3
SB_20610| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082) 28 5.7
SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013) 28 5.7
SB_7565| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 28 5.7
SB_2899| Best HMM Match : Spectrin (HMM E-Value=0.2) 28 5.7
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_54524| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 28 5.7
SB_54477| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 28 5.7
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 28 5.7
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 28 5.7
SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32) 28 7.6
SB_17161| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_23683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 166 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVN 324
E+YE L+ LD+LN+ LD LE ND ++ +++E L+ RQ E +++
Sbjct: 28 EDYEALDDKLDQLNTCLDKLENWNDSLNSRMREFLEDMQKSRQSQTGEANDLD 80
>SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1553
Score = 35.1 bits (77), Expect = 0.050
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 142 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEV 321
++ + E L+ES L+ N++L K D +QL+++ Q I QE++E E+
Sbjct: 797 EELEREANERVALVESKLNRTNTSLKDTSIKVSDYERQLEKVKQEKQEITQELQETKDEL 856
Query: 322 NNS 330
N +
Sbjct: 857 NTT 859
>SB_32124| Best HMM Match : K-box (HMM E-Value=4.1)
Length = 207
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +1
Query: 160 ITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMR 303
+ EEYE + ++EL ++ L+ +NDD Q+ K L Q ++ R++M+
Sbjct: 129 LQEEYESQKIKIEELEVRIEDLKEENDDYQQETKYLKQV-LSYREDMK 175
>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
Length = 1381
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +1
Query: 160 ITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMR 303
+ EEYE + ++EL ++ L+ +NDD Q+ K L Q ++ R++M+
Sbjct: 866 LQEEYESQKIKIEELEVRIEDLKEENDDYQQETKYLKQV-LSYREDMK 912
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 154 EDITEEYELLESTLD-ELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKE 318
E + EE + ES ++ EL LE + +D+ + LKELL+ + ++EM E E
Sbjct: 189 EKVLEELKRKESVMESELLRQKASLENEKEDLERSLKELLEKSPKEKEEMLSEELE 244
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 178 LLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEV 321
LLES L E +D LERK+ ++ ++L + + + + E +E+
Sbjct: 2159 LLESALGEYQDHIDMLERKSKELEEELNTKSEKEVEMLSRVNELQEEL 2206
>SB_17326| Best HMM Match : DUF1127 (HMM E-Value=0.71)
Length = 333
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 136 PXDDNNEDITEEYE-LLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 312
P ++ EE E +L+ TL + L + +HQ+ + L + N+A+++ R ++
Sbjct: 235 PKGTRKSNVREEMERVLQYTLLRGEHQIKNLTAEAQTLHQEAQRLREENVALKKLQRLQD 294
Query: 313 KEVNN 327
+E+N+
Sbjct: 295 RELND 299
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +1
Query: 148 NNEDITEEYELL----ESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 315
NN ++T E L E + EL L L ++ D+ H Q + + + +E+RE+ K
Sbjct: 1006 NNSNLTVENSKLKRESERQIKELQEILGTLRKELDEAHNQARSACANELVAMEELREQTK 1065
>SB_23024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +1
Query: 142 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEV 321
DD+ + +L S ++ L + L+F + K D + LK Q ++ QE++ N+++
Sbjct: 296 DDDVVVVVVVVAILRSEVETLRAELEFNQHKTDQYEELLKSERQRIRSLEQELQSTNEKL 355
Query: 322 NNSN*RNAN 348
+ N N
Sbjct: 356 HFQTETNMN 364
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 31.5 bits (68), Expect = 0.62
Identities = 13/59 (22%), Positives = 32/59 (54%)
Frame = +1
Query: 151 NEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNN 327
+E I E+ + + LD+L + D+ Q++ L +SN+ + + ++++ E+N+
Sbjct: 1812 DEKIEEQEDEIHELLDKLGGMSQTDGGDSSDLESQIERLKRSNVRLEDQNKQKDAEINS 1870
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 163 TEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEV 321
T+E E+ LD+L + D+LE +N+ + L SN ++ + + KE+
Sbjct: 549 TKEKTQREALLDKLRATKDYLEEQNESLKASLDAARDSNDLLKADQSKLLKEI 601
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +1
Query: 154 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN 333
+D+ L +D L ++L+ ++RKN ++ LL+ I REE + S+
Sbjct: 220 DDLISTQRSLTRDVDHLTTSLEEVQRKNRKYADEVDRLLKKIQNIEDSFREEKAVLIKSH 279
Query: 334 *RNANTAL 357
+ NT L
Sbjct: 280 ESDKNTVL 287
>SB_35717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = -3
Query: 423 FYTFETNKLH*VTCIFAQLNLK*CCICISSITVVDFLIFFTHFLSNCNIGLQKLFQLLVN 244
++ NK H V + QLN I + ++T+ L F T + +C + L L++
Sbjct: 74 YFVARENKYHSVQPLSCQLNQCKLLIAVRTVTLYGLLPFCTSTIVDCRENINSLLATLLD 133
Query: 243 IIIFTLQEIQCR 208
I T +QC+
Sbjct: 134 ITRTT--TVQCQ 143
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +1
Query: 130 EPPXDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 309
EP D ++++ L++ DELN+ + + +++ +LKE LQ+ ++I + ++
Sbjct: 118 EPTIDRLKRELSDSDNNLQAVQDELNAKFQEYKDRENELKVKLKE-LQAKLSICAKRDQK 176
Query: 310 NKE 318
N E
Sbjct: 177 NAE 179
>SB_2494| Best HMM Match : M (HMM E-Value=0.0056)
Length = 737
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 142 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM 300
DDNN D+ +E L+ + +L + R+ + +L E N +++E+
Sbjct: 328 DDNNNDLDQELSALKGQMWKLEGQAESYSRQKSQLKIELDEERAKNAGLKKEL 380
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 136 PXDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 315
P + E EYELL+ +++L S L E + D+ ++ K L + +++ E+
Sbjct: 1141 PLMEKYESTMREYELLKDEVEQLRSKLSTTELQLDEEIRKRKALQKERDDKAEDLYEKEN 1200
Query: 316 EV 321
EV
Sbjct: 1201 EV 1202
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Frame = +1
Query: 154 EDITEEYELLESTLDELNSALDFLE-------RKNDDIHQQLKELLQSNIAIRQEMREEN 312
ED+ E LE LD L L+F + ++ND + +++ EL + NI+ + ++ E N
Sbjct: 1832 EDLRAEKTSLEIELDNLKKDLEFAKQTGVEYTKENDTLQKEIIELREENISQKSKLYEIN 1891
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +1
Query: 196 DELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNS 330
++L +A+ L++ ND ++Q LKE L + + + E NKE+N S
Sbjct: 385 EKLGAAMRDLDKANDHVNQ-LKEKLGAVMRDLDKANERNKELNES 428
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = +1
Query: 151 NEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNS 330
N + EE+ L+ T D LNS+ + + + D+ ++L+E + ++ ++ E + +
Sbjct: 573 NASLHEEFSQLKETCDTLNSSFEEKDHELVDLTERLREKTREVESLTTQLEEAKSALQSK 632
Query: 331 N*RNANT 351
NT
Sbjct: 633 KQELENT 639
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 145 DNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMR 303
+ E+ ++YE + L EL + L+ E+K D ++KEL + + +R
Sbjct: 111 ERTEEAEKQYEEISERLQELENELEEAEQKADAAEARVKELEEEVTLVGNNLR 163
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Frame = +1
Query: 181 LESTLDELNSALDFLERKNDDIHQQLKELL----QSNIAIRQEMREENK 315
L+ T+DEL++++ + K I +QLK+ L + A+++E+ E+ K
Sbjct: 846 LKKTVDELSNSITLRDEKITKIKEQLKQTLEKFKEKEKALKEEIAEKEK 894
>SB_45474| Best HMM Match : PilO (HMM E-Value=1.9)
Length = 228
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNN 327
ELL+ L L ++LDFL K D I LK++ + ++ E+ +EN +++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVK-ELSKENSRLHS 56
>SB_43555| Best HMM Match : Shugoshin_N (HMM E-Value=2.7)
Length = 99
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNN 327
ELL+ L L ++LDFL K D I LK++ + ++ E+ +EN +++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVK-ELSKENSRLHS 56
>SB_36254| Best HMM Match : Filament (HMM E-Value=0.21)
Length = 589
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/74 (25%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +1
Query: 145 DNNEDITEEYELLE---STLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM---RE 306
+N+++ E Y+L S D L + L+ K+DD+ ++ + L + A+++E+ RE
Sbjct: 269 ENDKNKVENYKLKTAKFSAEDSLREEVGSLKSKSDDLEKEREMLQREKNALQRELRNVRE 328
Query: 307 ENKEVNNSN*RNAN 348
+ +V N + +++N
Sbjct: 329 KLMDVENVHKQSSN 342
>SB_23221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNN 327
ELL+ L L ++LDFL K D I LK++ + ++ E+ +EN +++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVK-ELSKENSRLHS 56
>SB_56379| Best HMM Match : Shugoshin_N (HMM E-Value=2.7)
Length = 109
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNN 327
ELL+ L L ++LDFL K D I LK++ + ++ E+ +EN +++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVK-ELSKENSRLHS 56
>SB_56085| Best HMM Match : Shugoshin_N (HMM E-Value=2.7)
Length = 116
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNN 327
ELL+ L L ++LDFL K D I LK++ + ++ E+ +EN +++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVK-ELSKENSRLHS 56
>SB_53647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNN 327
ELL+ L L ++LDFL K D I LK++ + ++ E+ +EN +++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVK-ELSKENSRLHS 56
>SB_50205| Best HMM Match : Shugoshin_N (HMM E-Value=2.7)
Length = 91
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNN 327
ELL+ L L ++LDFL K D I LK++ + ++ E+ +EN +++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVK-ELSKENSRLHS 56
>SB_37800| Best HMM Match : Shugoshin_N (HMM E-Value=2.7)
Length = 109
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNN 327
ELL+ L L ++LDFL K D I LK++ + ++ E+ +EN +++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVK-ELSKENSRLHS 56
>SB_32928| Best HMM Match : PilO (HMM E-Value=1.9)
Length = 228
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNN 327
ELL+ L L ++LDFL K D I LK++ + ++ E+ +EN +++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVK-ELSKENSRLHS 56
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/74 (25%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +1
Query: 145 DNNEDITEEYELLE---STLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM---RE 306
+N+++ E Y+L S D L + L+ K+DD+ ++ + L + A+++E+ RE
Sbjct: 2797 ENDKNKVENYKLKTAKFSAEDSLREEVGSLKSKSDDLEKEREMLQREKNALQRELRNVRE 2856
Query: 307 ENKEVNNSN*RNAN 348
+ +V N + +++N
Sbjct: 2857 KLMDVENVHKQSSN 2870
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 196 DELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN*RNANTAL 357
D L + ++++D+I +++KE L+S ++ QE +EE + + N N T L
Sbjct: 2658 DHLTNFKQSCQKQSDEI-RRIKEDLKSKESLLQETKEELEALKEENSENKETIL 2710
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 193 LDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN*RNAN 348
L++++ L L K DD+ ++ +E+ R+E+R+E E+ N+ N
Sbjct: 2810 LEKMDDNLTELRLKYDDLVKEREEVKSDLATTREELRQEQIELKNARKEGEN 2861
>SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023)
Length = 873
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/53 (26%), Positives = 34/53 (64%)
Frame = +1
Query: 166 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVN 324
+E + +T +++ + +E KN + Q+L++ L SN + +++R+ENK+++
Sbjct: 193 KESPSISATKEKIRLLTEEIEEKNV-VMQELRDELISNKKLVEKLRQENKQLS 244
>SB_20610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNN 327
ELL+ L L ++LDFL K D I LK++ + ++ E+ +EN +++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVK-ELSKENSRLHS 56
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +1
Query: 163 TEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN*RN 342
TE L++ LD+ + LER+N + Q+LK Q++IA +Q+ + + ++
Sbjct: 743 TESEAKLKAQLDQQLRKIHDLERENSRVSQELKN-AQAHIAQKQKELQTCERISELEENK 801
Query: 343 ANT 351
A+T
Sbjct: 802 ADT 804
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 166 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM 300
EE+ + LN L+ L+ KN +H+QL+E+ + ++E+
Sbjct: 678 EEFRQDRDLISGLNMQLENLKNKNKMLHEQLEEVSNEVVQGKEEL 722
>SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082)
Length = 478
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 130 EPPXDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAI 288
E D I + E +S DEL S L+ KND+I Q K+ +++ + +
Sbjct: 323 EETEQDIENRIQDAIEKYKSLPDELASMKAVLDMKNDEIKQLRKDRMEAKMEL 375
>SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013)
Length = 663
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 154 EDITEEYELLESTLDELNSALDFLERKN-DDIHQQLKELLQSNIAI-RQEMREENKEVNN 327
E+ T+ E L L+E L +RKN I ++L QS + + E +EN + N
Sbjct: 323 EEKTKTVEHLTLALEEAKDELQVAKRKNASTIKDLTRQLQQSRRQVEKMESNQENLQNGN 382
Query: 328 SN*RNANT 351
++ ++++T
Sbjct: 383 NDSKSSST 390
>SB_7565| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 267
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 315
ELL+ L L ++LDFL K D I LK++ + +++ +E ++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSR 53
>SB_2899| Best HMM Match : Spectrin (HMM E-Value=0.2)
Length = 139
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 157 DITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 312
D+ + + LES LD+L + DD+ + L Q A+R ++ + N
Sbjct: 62 DVYKGLKRLESDLDQLTYQMTTARESGDDMIRHLHSTHQDTTAVRDKLDDVN 113
>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2509
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 157 DITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 312
D+ + + LES LD+L + DD+ + L Q A+R ++ + N
Sbjct: 2381 DVYKGLKRLESDLDQLTYQMTTARESGDDMIRHLHSTHQDTTAVRDKLDDVN 2432
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 226 ERKNDDIHQQLKELLQSNIAIRQEMREENKEVNN 327
ER D QQL +L Q ++ +REE + +N
Sbjct: 505 ERMRQDYEQQLSDLKQEVFSLTARLREEEQNADN 538
>SB_54524| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 259
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 315
ELL+ L L ++LDFL K D I LK++ + +++ +E ++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSR 53
>SB_54477| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 267
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 315
ELL+ L L ++LDFL K D I LK++ + +++ +E ++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSR 53
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 184 ESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKE 318
E L+E+ LD +K + I ++ K+L + ++ +E+R NK+
Sbjct: 2304 EEQLEEMQFLLDKKSKKLERITKESKDLKEKVTSLEEELRLSNKQ 2348
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 157 DITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 312
D+ + + LES LD+L + DD+ + L Q A+R ++ + N
Sbjct: 89 DVYKGLKRLESDLDQLTYQMTTARESGDDMIRHLHSTHQDTTAVRDKLDDVN 140
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +1
Query: 181 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 315
LESTLDE+N L+ ++ ++ +++K L+ ++ + Q+ EE +
Sbjct: 1018 LESTLDEVNLNLEREKKVRGEV-EKVKRKLEGDLKMTQQTLEETQ 1061
>SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32)
Length = 584
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +1
Query: 151 NEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKE 318
N+ +T+E E ++ L D R+ ++ + LKE + N +++E+ E ++
Sbjct: 11 NKSLTDEIEAVQLQLQMACERRDQYNRQLNEALESLKEQRERNTVLQKELTERKQD 66
>SB_17161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/60 (25%), Positives = 35/60 (58%)
Frame = +1
Query: 154 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN 333
+++ E +L+E ++E +S + E + Q+++ L +N ++RQ++R +E N+N
Sbjct: 91 KEVVEIKDLVEERVEETSSIAERDELVTA-LKQEVQRLKGNNDSLRQQIRHLKRETCNAN 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,668,150
Number of Sequences: 59808
Number of extensions: 255045
Number of successful extensions: 895
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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