Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_N10
(650 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g45310.1 68418.m05562 expressed protein 31 0.50
At5g65310.1 68418.m08216 homeobox-leucine zipper protein 5 (HB-5... 31 0.66
At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein... 31 0.88
At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein... 31 0.88
At3g19790.1 68416.m02506 hypothetical protein ; expression suppo... 30 1.2
At3g01470.1 68416.m00071 homeobox-leucine zipper protein 5 (HAT5... 29 2.0
At1g66810.1 68414.m07594 zinc finger (CCCH-type) family protein ... 29 2.0
At1g01780.1 68414.m00097 LIM domain-containing protein similar t... 29 3.5
At5g52000.1 68418.m06453 importin alpha-1 subunit, putative simi... 28 4.7
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 28 4.7
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 28 4.7
At2g06775.1 68415.m00756 hypothetical protein 28 4.7
At1g30810.1 68414.m03767 transcription factor jumonji (jmj) fami... 28 4.7
At5g40450.1 68418.m04905 expressed protein 28 6.2
At4g32190.1 68417.m04581 centromeric protein-related low similar... 28 6.2
At3g12020.1 68416.m01490 kinesin motor protein-related similar t... 28 6.2
At2g07340.2 68415.m00842 prefoldin-related KE2 family protein co... 27 8.2
At2g07340.1 68415.m00841 prefoldin-related KE2 family protein co... 27 8.2
>At5g45310.1 68418.m05562 expressed protein
Length = 352
Score = 31.5 bits (68), Expect = 0.50
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 142 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQ 294
+ N + +EY ++E LDEL D K + + +L+EL + N+ + +
Sbjct: 111 EKNLREAIKEYRIMEQDLDELEDEHDEAISKIEKLEAELQELKEENLQLME 161
>At5g65310.1 68418.m08216 homeobox-leucine zipper protein 5 (HB-5) /
HD-ZIP transcription factor 5 identical to
homeobox-leucine zipper protein ATHB-5 (HD-ZIP protein
ATHB-5) (SP:P46667) [Arabidopsis thaliana]
Length = 312
Score = 31.1 bits (67), Expect = 0.66
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 154 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKEL 267
+ + +Y +L+S D L D L+R ND + Q+KEL
Sbjct: 127 KQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKEL 164
>At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +1
Query: 157 DITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN* 336
D +E+ L+S + + + R+ DDI +L + + + +E+ E NKE+
Sbjct: 249 DADKEFRWLKSAVSSSEKEYEQISRRTDDIKLELDDERREKKKLEEELMELNKELEELGS 308
Query: 337 RNANTAL 357
+ A+
Sbjct: 309 ESVEAAI 315
>At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1260
Score = 30.7 bits (66), Expect = 0.88
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +1
Query: 160 ITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN*R 339
++E LE +L+SA +E KN D+ LLQ+N+ +E+RE ++++ N +
Sbjct: 795 VSELENKLEVLAQDLDSAESTIESKNSDML-----LLQNNLKELEELREMKEDIDRKNEQ 849
Query: 340 NA 345
A
Sbjct: 850 TA 851
>At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1259
Score = 30.7 bits (66), Expect = 0.88
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +1
Query: 160 ITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN*R 339
++E LE +L+SA +E KN D+ LLQ+N+ +E+RE ++++ N +
Sbjct: 794 VSELENKLEVLAQDLDSAESTIESKNSDML-----LLQNNLKELEELREMKEDIDRKNEQ 848
Query: 340 NA 345
A
Sbjct: 849 TA 850
>At3g19790.1 68416.m02506 hypothetical protein ; expression
supported by MPSS
Length = 167
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +1
Query: 151 NEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNS 330
+E+ ++E L++S + E+ + ++ + DD+ L ++L + I +R NK+ ++S
Sbjct: 44 SEESSDEENLVDSLMSEMIN--EWYDEMYDDLTDGLDDILAARIPSLSALRTSNKQPSDS 101
Query: 331 N 333
N
Sbjct: 102 N 102
>At3g01470.1 68416.m00071 homeobox-leucine zipper protein 5 (HAT5) /
HD-ZIP protein 5 / HD-ZIP protein (HB-1) identical to
homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5)
(HD-ZIP protein ATHB-1) GB:Q02283 [Arabidopsis thaliana]
Length = 272
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +1
Query: 154 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 309
+ + +Y+LL+ST D+L S D + ND + ++ L + + +QE E
Sbjct: 123 KQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTE-KLQGKQETANE 173
>At1g66810.1 68414.m07594 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 310
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 154 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQ 273
+++ E YEL + L L + LD L +ND + + +LL+
Sbjct: 90 DELNEHYELCLNRLQSLMTELDSLRHENDSLRFENSDLLK 129
>At1g01780.1 68414.m00097 LIM domain-containing protein similar to
PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain
protein PLIM1 [Nicotiana tabacum] GI:5932418; contains
Pfam profile PF00412: LIM domain
Length = 205
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 503 CIIIHLRYLSMNNYLSCLHHLNVISCIFMSIGMNNNI*LSIVHRK 637
C + H Y S+++ L C HH N +FM G ++ + HR+
Sbjct: 136 CTLTHSSYASLDSVLYCRHHFNQ---LFMEKGNYAHVLQAANHRR 177
>At5g52000.1 68418.m06453 importin alpha-1 subunit, putative similar
to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 441
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +1
Query: 142 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEV 321
+ N+ED+ Y LL + L KNDDI+++ ++L +N EE+ E
Sbjct: 375 EKNSEDVNP-YCLLIEDAEGLEKISKLQMNKNDDIYEKAYKILVTN------WFEEDDEN 427
Query: 322 NNSN*R 339
NN+N R
Sbjct: 428 NNNNVR 433
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 166 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQ-EMREENKE 318
EE+ + L + + LE +N + QQ++E ++ + I+Q + EEN++
Sbjct: 152 EEFRTEATHLKNQQATIRRLEERNRQLEQQMEEKIKEVVEIKQRNLAEENQK 203
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 127 IEPPXDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQ---QLKELLQSNIAIRQE 297
+E D+ + I+E LLES +ELN LE +D+ Q E+++ + +
Sbjct: 158 LEATVDEYSVKISESENLLESIRNELNVTQGKLESIENDLKAAGLQESEVMEKLKSAEES 217
Query: 298 MREENKEVNNS 330
+ ++ +E++ +
Sbjct: 218 LEQKGREIDEA 228
>At2g06775.1 68415.m00756 hypothetical protein
Length = 128
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Frame = +1
Query: 142 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQ-------EM 300
++ +D+T E +E L E+N+A L DDI Q ++ + + ++
Sbjct: 57 EEKFDDLTNRLENMEGALVEINNA---LLNHQDDIQDQYTRIVNVGLVVDTVESHLDWKI 113
Query: 301 REENKEVNNSN 333
E K++NNSN
Sbjct: 114 EELEKKLNNSN 124
>At1g30810.1 68414.m03767 transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein
contains similarity to Swiss-Prot:P29375
retinoblastoma-binding protein 2 (RBBP-2) [Homo
sapiens]; contains Pfam domains PF02375: jmjN domain and
PF02373: jmjC domain; intron between exons 6 and 7 was
required to circumvent a frameshift. There could be an
underlying sequence error.
Length = 787
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +1
Query: 157 DITEEYELLESTLDELNSALDFLERKNDDI 246
D+ + + LL T+DEL+S + LE ++DD+
Sbjct: 521 DVKDGFILLRYTMDELSSLVRALEGESDDL 550
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/53 (30%), Positives = 33/53 (62%)
Frame = +1
Query: 184 ESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN*RN 342
E +++E N+ + ++ + +Q +E Q+NI +++E+REE KE+N + N
Sbjct: 2681 EVSVEEKNNTSENIDHEAAKEIEQ-EEGKQTNI-VKEEIREEEKEINQESFNN 2731
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 151 NEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQ 294
N+++TE L+ S D+L A + L+ K+ +H+ EL S + + +
Sbjct: 503 NQEVTELKALMISREDQLMEATEMLKEKDVHLHRIEGELGSSKLKVTE 550
>At3g12020.1 68416.m01490 kinesin motor protein-related similar to
putative kinesin heavy chain GB:AAD23684 GI:4567271 from
[Arabidopsis thaliana]
Length = 1030
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Frame = +1
Query: 130 EPPXDDNNEDITEEYELLESTLDELNSALDFLERKNDDI----HQQL--KELLQSNIAIR 291
E NE+I EE ++L + N + LER+ D H+ L +++Q+ +R
Sbjct: 662 EAAKSPQNEEINEEIKVLNDDIKAKNDQIATLERQIMDFVMTSHEALDKSDIMQAVAELR 721
Query: 292 QEMREENKEV 321
++ E++ E+
Sbjct: 722 DQLNEKSFEL 731
>At2g07340.2 68415.m00842 prefoldin-related KE2 family protein
contains similarity to Swiss-Prot:O60925 prefoldin
subunit 1 [Homo sapiens]; contains Pfam domain, PF01920:
KE2 family protein
Length = 127
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 184 ESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM 300
E+ + L ++ ++LE++ ++ L+ELLQ I Q++
Sbjct: 84 EAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIAQQI 122
>At2g07340.1 68415.m00841 prefoldin-related KE2 family protein
contains similarity to Swiss-Prot:O60925 prefoldin
subunit 1 [Homo sapiens]; contains Pfam domain, PF01920:
KE2 family protein
Length = 128
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 184 ESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM 300
E+ + L ++ ++LE++ ++ L+ELLQ I Q++
Sbjct: 85 EAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIAQQI 123
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,236,235
Number of Sequences: 28952
Number of extensions: 172376
Number of successful extensions: 606
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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