Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_M22
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 2.2
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 28 6.7
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 27 8.8
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 27 8.8
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 27 8.8
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 27 8.8
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 27 8.8
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 27 8.8
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 27 8.8
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 27 8.8
>Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical
protein F23B12.7 protein.
Length = 953
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 329 GERVFKSRGSPPWAVRRNGVLSNQHTARGILKREIP 436
G R+ + + PW VR+ V SN++T + + EIP
Sbjct: 707 GTRIVRKKAHDPWGVRKLAVGSNEYTQK--RREEIP 740
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 553 RAKLPRHTPQPPSRPAHPCSPYSREKLP 636
R + P TP PP R P S S EK+P
Sbjct: 2821 REETPEPTPSPPVRLLRPLSAESEEKVP 2848
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 346 VPGQPPLGSPKKWSSLQPTHCSRNS*ARNTRPSN 447
VP QPP G P+ W P + S ++ P N
Sbjct: 700 VPNQPPSGEPEHWRGPPPVSHQQQSQQQHPPPIN 733
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +3
Query: 213 CSGSIHSNSIIFILFTKISKIPRIASANLVLPTQGPRRKASACLSPGAAPPGQSEEMEFS 392
C G + + + + ++P I + + R+ CL+ G PP E+E+
Sbjct: 772 CVGENMAGKDVQVANLSVGRVPTIIESPHTVRVNIERQVTLQCLAVGIPPP----EIEWQ 827
Query: 393 PTNTLLAEFLSEKYPAL 443
N LLA + +Y L
Sbjct: 828 KGNVLLATLNNPRYTQL 844
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +3
Query: 213 CSGSIHSNSIIFILFTKISKIPRIASANLVLPTQGPRRKASACLSPGAAPPGQSEEMEFS 392
C G + + + + ++P I + + R+ CL+ G PP E+E+
Sbjct: 772 CVGENMAGKDVQVANLSVGRVPTIIESPHTVRVNIERQVTLQCLAVGIPPP----EIEWQ 827
Query: 393 PTNTLLAEFLSEKYPAL 443
N LLA + +Y L
Sbjct: 828 KGNVLLATLNNPRYTQL 844
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +3
Query: 213 CSGSIHSNSIIFILFTKISKIPRIASANLVLPTQGPRRKASACLSPGAAPPGQSEEMEFS 392
C G + + + + ++P I + + R+ CL+ G PP E+E+
Sbjct: 772 CVGENMAGKDVQVANLSVGRVPTIIESPHTVRVNIERQVTLQCLAVGIPPP----EIEWQ 827
Query: 393 PTNTLLAEFLSEKYPAL 443
N LLA + +Y L
Sbjct: 828 KGNVLLATLNNPRYTQL 844
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +3
Query: 213 CSGSIHSNSIIFILFTKISKIPRIASANLVLPTQGPRRKASACLSPGAAPPGQSEEMEFS 392
C G + + + + ++P I + + R+ CL+ G PP E+E+
Sbjct: 772 CVGENMAGKDVQVANLSVGRVPTIIESPHTVRVNIERQVTLQCLAVGIPPP----EIEWQ 827
Query: 393 PTNTLLAEFLSEKYPAL 443
N LLA + +Y L
Sbjct: 828 KGNVLLATLNNPRYTQL 844
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +3
Query: 213 CSGSIHSNSIIFILFTKISKIPRIASANLVLPTQGPRRKASACLSPGAAPPGQSEEMEFS 392
C G + + + + ++P I + + R+ CL+ G PP E+E+
Sbjct: 772 CVGENMAGKDVQVANLSVGRVPTIIESPHTVRVNIERQVTLQCLAVGIPPP----EIEWQ 827
Query: 393 PTNTLLAEFLSEKYPAL 443
N LLA + +Y L
Sbjct: 828 KGNVLLATLNNPRYTQL 844
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 575 HRSLRRAQHTRVPHTPAKNSRVYRG 649
HR +H + TP K SR YRG
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRG 27
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 575 HRSLRRAQHTRVPHTPAKNSRVYRG 649
HR +H + TP K SR YRG
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRG 27
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 575 HRSLRRAQHTRVPHTPAKNSRVYRG 649
HR +H + TP K SR YRG
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRG 27
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 575 HRSLRRAQHTRVPHTPAKNSRVYRG 649
HR +H + TP K SR YRG
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRG 27
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 575 HRSLRRAQHTRVPHTPAKNSRVYRG 649
HR +H + TP K SR YRG
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRG 27
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 575 HRSLRRAQHTRVPHTPAKNSRVYRG 649
HR +H + TP K SR YRG
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRG 27
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 575 HRSLRRAQHTRVPHTPAKNSRVYRG 649
HR +H + TP K SR YRG
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRG 27
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 575 HRSLRRAQHTRVPHTPAKNSRVYRG 649
HR +H + TP K SR YRG
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRG 27
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 349 PGQPPLGSPKKWSSLQPTHCSRNS*ARNTRPSNXNF 456
PG P G+P S QP HC RP F
Sbjct: 355 PGTRPRGNPCDQCSAQPNHCPSGPPGPRGRPGPPGF 390
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 562 LPRHTPQPPSRPAHPCSPYSREKLPRXPRQ 651
LP T QP P+H P S++ LP P Q
Sbjct: 314 LPSSTGQP-GHPSHHMGPLSQQLLPSGPNQ 342
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 562 LPRHTPQPPSRPAHPCSPYSREKLPRXP 645
LP + +PP++P HP +P P+ P
Sbjct: 135 LPGNPGRPPAQPCHPITPPPCRPCPQGP 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,750,807
Number of Sequences: 27780
Number of extensions: 262320
Number of successful extensions: 1104
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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