Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_M21
(642 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 30 0.25
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 29 0.75
SPBC1348.02 |||S. pombe specific 5Tm protein family|Schizosaccha... 27 2.3
SPBPB2B2.19c |||S. pombe specific 5Tm protein family|Schizosacch... 27 2.3
SPAC977.01 |||S. pombe specific 5Tm protein family|Schizosacchar... 27 2.3
SPAC750.05c |||S. pombe specific 5Tm protein family|Schizosaccha... 27 2.3
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 27 3.0
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 26 4.0
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 26 5.3
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 26 5.3
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 26 5.3
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 26 5.3
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 7.0
SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr 1|||... 25 9.3
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 25 9.3
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 25 9.3
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 25 9.3
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 25 9.3
SPAC19B12.11c |||zinc finger protein|Schizosaccharomyces pombe|c... 25 9.3
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 30.3 bits (65), Expect = 0.25
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +2
Query: 137 KKKFSCSLTINMYTLKGIFPEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTN 316
KKK S ++ L+ I + KK+ KK + + K+ K ++ K ++ +D
Sbjct: 178 KKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEKKKKKIKLKDKPE 237
Query: 317 SATGSTIGQVKSSPSNKSAKISLNIGKPG-AANRKKLSDNVRIKK 448
S S++ +VK N+ A I + + A R +SD V +++
Sbjct: 238 ST--SSVEKVKE--GNRPASIHFHTRRKFLAQKRAAVSDPVALRE 278
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 28.7 bits (61), Expect = 0.75
Identities = 13/57 (22%), Positives = 29/57 (50%)
Frame = +2
Query: 347 KSSPSNKSAKISLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELXQMKPVXLQND 517
K P +K++ ++ + + N KK+ + +++K + E L+ + KP+ ND
Sbjct: 873 KVLPVSKTSDLTDKVNRRQRKNDKKIKNKIQVKLSSILEMLRSRYKKFKKPIIDLND 929
>SPBC1348.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 489 CXSSLRLRNSAMSPFFIRTLSESFFLFAAPGLPMFKLILALLFDGEDFT*PIVL 328
C S N++ + FF R L+ F+F A PM + ++F D+ +++
Sbjct: 253 CTSVTTYENASKARFFRRMLNAFIFIFCAS--PMLHYLSNIIFGNFDYRLSVII 304
>SPBPB2B2.19c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 489 CXSSLRLRNSAMSPFFIRTLSESFFLFAAPGLPMFKLILALLFDGEDFT*PIVL 328
C S N++ + FF R L+ F+F A PM + ++F D+ +++
Sbjct: 253 CTSVTTYENASKARFFRRMLNAFIFIFCAS--PMLHYLSNIIFGNFDYRLSVII 304
>SPAC977.01 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1||Partial|Manual
Length = 316
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 489 CXSSLRLRNSAMSPFFIRTLSESFFLFAAPGLPMFKLILALLFDGEDFT*PIVL 328
C S N++ + FF R L+ F+F A PM + ++F D+ +++
Sbjct: 225 CTSVTTYENASKARFFRRMLNAFIFIFCAS--PMLHYLSNIIFGNFDYRLSVII 276
>SPAC750.05c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 489 CXSSLRLRNSAMSPFFIRTLSESFFLFAAPGLPMFKLILALLFDGEDFT*PIVL 328
C S N++ + FF R L+ F+F A PM + ++F D+ +++
Sbjct: 253 CTSVTTYENASKARFFRRMLNAFIFIFCAS--PMLHYLSNIIFGNFDYRLSVII 304
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 26.6 bits (56), Expect = 3.0
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 323 TGSTIGQVKSSPSNKSAKISLNIGKPGAANRKKLSDN 433
T ST Q SSP +KSA +S + K N K+ SD+
Sbjct: 203 TQSTHEQTLSSPISKSASVSKSENK-ALVNNKRYSDS 238
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 26.2 bits (55), Expect = 4.0
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 269 SPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLNIGKPGAANRKKLSDNVR 439
+P+ S L TN+ G + ++S SNK A L + AA+ +L ++
Sbjct: 318 TPEAVSNKLVFLQNTNANLGERVSSLESQLSNKPANQPLGANEKDAAHITELETKLK 374
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 512 NDDENSSESSGHLRDVACXTIESNLSQKLTESTKLTVLYP 631
NDD+N S+ S + C N Q+L+E +L + YP
Sbjct: 97 NDDDNDSQDSSWINVRVCV----NCRQQLSELKELDLPYP 132
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 25.8 bits (54), Expect = 5.3
Identities = 20/93 (21%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +2
Query: 167 NMYTLKGIFPEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQ--DMTNSATGSTIG 340
N L P +D++ + I +++++ +++S +E + L+ + + N S
Sbjct: 72 NEVALFATAPYDHEDEEADKIYQSVEEHLSKRRKSQREKQEQLQKEKYEKENPKVSSQFA 131
Query: 341 QVKSSPSNKSAKISLNIGKPGAANRKKLSDNVR 439
+K S + + NI +PG RKK + R
Sbjct: 132 DLKRGLSTLTDEDWNNIPEPGDLTRKKRTKQPR 164
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 5.3
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 618 VNFVLSVSFCERLDSIVWQATSRRCPDDSEEFSSSFC 508
VNF +++ E+ + ++ A C DD F S C
Sbjct: 344 VNFTVALKVPEKSNKEIFTAFFNICSDDGSVFHKSLC 380
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 25.8 bits (54), Expect = 5.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 539 SGHLRDVACXTIESNLSQKLTESTKLT 619
+GHL DV C T N + LT S+ T
Sbjct: 460 AGHLSDVDCVTFHPNSAYVLTGSSDKT 486
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 25.4 bits (53), Expect = 7.0
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 200 PKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKI 379
P+K+Q+ + K K ++KQS + D + + + S+ +NK +I
Sbjct: 64 PRKNQQLASSERKTKNKKRLEKQSSAIADSIGESLDDPQTVYDEHLFDILSARTNKRGQI 123
Query: 380 SLN 388
+LN
Sbjct: 124 NLN 126
>SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 25.0 bits (52), Expect = 9.3
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 230 KENMKQLKYIQ-KQSPKETSKSLR-TQDMTNSATGSTIGQVKSSPSNKSAKISLNIGKPG 403
+EN Q IQ Q + K L+ T+ TNSATGS K+ SN +++I
Sbjct: 97 QENEIQRLTIQITQDFQRCQKLLQVTKAQTNSATGSEALMAKNFLSNLASRIQTE----S 152
Query: 404 AANRKKLSDNVRIKKG 451
A RKK S ++ +G
Sbjct: 153 AQFRKKQSTYLKKLRG 168
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 25.0 bits (52), Expect = 9.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 344 VKSSPSNKSAKISLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELXQMKPV 502
+K+ P+ KSAKI G ++S + KG KEL +P+
Sbjct: 456 IKTVPNMKSAKIDATYGCDACNIHTRMSTQIVYFKGMPYNEHNYKELDSFEPI 508
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 113 YLNNECVFKKKFSCSLTINMYTLKGIFPEPKKDQKKNFI 229
+L+ +F K T+ ++LK + DQK+NFI
Sbjct: 56 FLSANKIFYSKLRVYQTVRHWSLKQNWSSMSLDQKRNFI 94
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 347 KSSPSNKSAKISLNIGKPGAANRKKLSDNVRI 442
K SPS ++K I KP ++ ++S N RI
Sbjct: 139 KESPSVTTSKHVATITKPSTSSIARMSSNARI 170
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 195 GNIPFKVYMLIVKLQLNFFLNTHSLFRYQQIQH 97
G P + LI + QL F+N HS F + + QH
Sbjct: 236 GTGPHAIRWLIYR-QLRDFINLHSHFLFFEFQH 267
>SPAC19B12.11c |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 124
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 359 SNKSAKISLNIGKPGAANRKKLSDNVRIKKGD 454
+ + A+ ++NIG+P + KL+DN + D
Sbjct: 93 TQEEAEAAVNIGQPKQSVASKLADNSNVVMAD 124
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,450,634
Number of Sequences: 5004
Number of extensions: 49100
Number of successful extensions: 164
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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