Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_M21
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20574| Best HMM Match : Extensin_2 (HMM E-Value=0.25) 33 0.20
SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2) 33 0.20
SB_9537| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_39357| Best HMM Match : SASP_gamma (HMM E-Value=1.7) 31 0.60
SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17) 31 0.60
SB_9099| Best HMM Match : SASP_gamma (HMM E-Value=1.7) 31 0.60
SB_24811| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 31 0.80
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 31 1.1
SB_22971| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_16906| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_50648| Best HMM Match : Atrophin-1 (HMM E-Value=1.3) 30 1.8
SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27) 30 1.8
SB_51558| Best HMM Match : DSS1_SEM1 (HMM E-Value=0.2) 29 2.4
SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13) 29 2.4
SB_17994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_40140| Best HMM Match : SASP_gamma (HMM E-Value=0.36) 29 3.2
SB_36590| Best HMM Match : FGF (HMM E-Value=10) 29 3.2
SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1) 29 4.2
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 29 4.2
SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18) 29 4.2
SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_17998| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0) 28 5.6
SB_20649| Best HMM Match : SpoIIP (HMM E-Value=1.3) 28 5.6
SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13) 28 5.6
SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_26671| Best HMM Match : zf-TRAF (HMM E-Value=0.54) 28 7.4
SB_10877| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_34292| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_11988| Best HMM Match : Ank (HMM E-Value=5.1e-32) 27 9.8
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 27 9.8
>SB_20574| Best HMM Match : Extensin_2 (HMM E-Value=0.25)
Length = 1508
Score = 33.1 bits (72), Expect = 0.20
Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Frame = +2
Query: 125 ECVFKKKFSCSLTINMYTLKGIFPEPKKDQKKNFIKENMKQLKYIQKQSPK-ETSKSLRT 301
E +K N+Y ++G+ PE ++ KEN + K K+S K TS S R+
Sbjct: 928 ETTLAEKRGAEAIQNVYNIRGLNPEGMSSCDESSNKENEEIQKDASKESDKVSTSDSKRS 987
Query: 302 QDMTNSATGSTIGQVKSSPSNKSAKISLNIGKPGAANRKKLSDNVRIK 445
S + S + +P + K G G RK R K
Sbjct: 988 SVKDKSQSPSKAESSERTPRKTTEKSPSGKGVRGKDERKDSPKEARKK 1035
>SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2)
Length = 1706
Score = 33.1 bits (72), Expect = 0.20
Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Frame = +2
Query: 125 ECVFKKKFSCSLTINMYTLKGIFPEPKKDQKKNFIKENMKQLKYIQKQSPK-ETSKSLRT 301
E +K N+Y ++G+ PE ++ KEN + K K+S K TS S R+
Sbjct: 287 ETTLAEKRGAEAIQNVYNIRGLNPEGMSSCDESSNKENEEIQKDASKESDKVSTSDSKRS 346
Query: 302 QDMTNSATGSTIGQVKSSPSNKSAKISLNIGKPGAANRKKLSDNVRIK 445
S + S + +P + K G G RK R K
Sbjct: 347 SVKDKSQSPSKAESSERTPRKTTEKSPSGKGVRGKDERKDSPKEARKK 394
>SB_9537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 188 IFPEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSL 295
I P Q KNF KEN+ +K IQK + KE K L
Sbjct: 112 ILSRPGSAQPKNFTKENVNHIKKIQKAN-KEKQKDL 146
>SB_39357| Best HMM Match : SASP_gamma (HMM E-Value=1.7)
Length = 244
Score = 31.5 bits (68), Expect = 0.60
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 145 IQL*FDNQHV---YFEGYIPRAEERSKKELHQRKYEAAEIHSETITK 276
+QL D +H + +AEE SK E++Q K E A+I SE +TK
Sbjct: 188 LQLRLDTEHEEKRLLQEQFKQAEETSKDEINQLKDEIAKILSEQLTK 234
>SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17)
Length = 473
Score = 31.5 bits (68), Expect = 0.60
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 145 IQL*FDNQHV---YFEGYIPRAEERSKKELHQRKYEAAEIHSETITK 276
+QL D +H + +AEE SK E++Q K E A+I SE +TK
Sbjct: 280 LQLRLDTEHEEKRLLQEQFKQAEETSKDEINQLKDEIAKILSEQLTK 326
>SB_9099| Best HMM Match : SASP_gamma (HMM E-Value=1.7)
Length = 200
Score = 31.5 bits (68), Expect = 0.60
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 145 IQL*FDNQHV---YFEGYIPRAEERSKKELHQRKYEAAEIHSETITK 276
+QL D +H + +AEE SK E++Q K E A+I SE +TK
Sbjct: 144 LQLRLDTEHEEKRLLQEQFKQAEETSKDEINQLKDEIAKILSEQLTK 190
>SB_24811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 31.1 bits (67), Expect = 0.80
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 476 CV*GILPCLLFLSVH-CLKV--FSCLQHQVYQCLS*FWHFCLMVRILL 342
C+ + C L ++VH CL V CL V+ CLS H+CL V + L
Sbjct: 341 CLSVTVHCCLSVTVHYCLSVTVHYCLSVTVHCCLSVTVHYCLSVTVCL 388
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 455 CLLFLSVHCLKV--FSCLQHQVYQCLS*FWHFCLMVRI 348
CLL +CL V CL V+ CLS H+CL V +
Sbjct: 333 CLLLSVRYCLSVTVHCCLSVTVHYCLSVTVHYCLSVTV 370
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 455 CLLFLSVHCLKVFSCLQHQVYQCLS*FWHFCLMVRI 348
C L +CL V CL V CLS H CL V +
Sbjct: 319 CPLLYVHYCLSVTVCLLLSVRYCLSVTVHCCLSVTV 354
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -2
Query: 455 CLLFLSVHCLK--VFSCLQHQVYQCLS*FWHFCLMVRI 348
CL +CL V CL V+ CLS H+CL V +
Sbjct: 565 CLSVTVHYCLSATVHYCLSATVHYCLSVTVHYCLSVTV 602
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -2
Query: 455 CLLFLSVHCLKV--FSCLQHQVYQCLS*FWHFCLMVRI 348
C L +CL V CL V+ CLS H+CL V +
Sbjct: 557 CPLLSVRYCLSVTVHYCLSATVHYCLSATVHYCLSVTV 594
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 31.1 bits (67), Expect = 0.80
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 278 ETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLNIGKP-GAANRKKLSDNVRIKKGD 454
+TS +T ++ + +GSTIG+ SSP K + KP N S +I K +
Sbjct: 554 KTSSPAKTPVISAATSGSTIGKNISSPVKKPPGFISMVYKPIKIVNSTTSSIAEKIAKQE 613
Query: 455 MAEFLKRKELXQMK-PVXLQNDDENSSESSG 544
+ +K L +K L +DD SSE G
Sbjct: 614 EKKEIK-SVLDALKCDETLDSDDNTSSEEGG 643
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +2
Query: 203 KKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKIS 382
KKD+ K K +K+ + K+ PK+ ++ + T T SP++K K
Sbjct: 495 KKDETKKSEKAEIKKEEIKVKEEPKDDAEKKEDEGKEPDKTEQTTSAKSKSPASKDGKSR 554
Query: 383 LNIGKPGAANRK-KLSDNVRIKKGDMAEFLKRKEL 484
G + + K D +R ++ + K +E+
Sbjct: 555 SQKGSNSSDDSPVKSLDEIRRQRTERQRQAKAREV 589
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +2
Query: 239 MKQLKYIQKQSPKETSK-SLRTQDMTNSATG--STIGQVKSSPSNKSAKISLNIGKPGAA 409
MK LK K SP+ + + S +T T+ T +++ ++ S K SLN KPG
Sbjct: 359 MKSLKTSPKTSPEISPRTSPKTSSKTSPKTSLKTSLNTSLNTSQKTSLKRSLNTNKPG-- 416
Query: 410 NRKKLSDNVRIKKGDMAEFLKRKELXQMKP 499
K D + +K D E K ++ Q KP
Sbjct: 417 --DKSKDKLEVKPEDRPED-KPEDKQQNKP 443
>SB_22971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/101 (25%), Positives = 43/101 (42%)
Frame = +2
Query: 218 KNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLNIGK 397
+N K + K K K +K+ Q+ N T + SPS +A +S + K
Sbjct: 7 QNLKKSQENESKAAAKNRKKREAKARSKQEEENQPTSQVVENAPQSPSAPAAAVSGDNDK 66
Query: 398 PGAANRKKLSDNVRIKKGDMAEFLKRKELXQMKPVXLQNDD 520
+KKL +K A K+ E+ Q++ L+N+D
Sbjct: 67 KIRNLKKKLRQIEELKTQQKAG--KQLEVNQLE--KLKNED 103
>SB_16906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 194 PEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSA 373
PEP K+Q K+ K K + + PK+ K+ D++ S +G+++S + A
Sbjct: 47 PEPAKNQPAQDKKKEKKSEKKPKTEKPKKDEKNSGAADISVSRLNFMVGKIQSIKKHPDA 106
>SB_50648| Best HMM Match : Atrophin-1 (HMM E-Value=1.3)
Length = 1281
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 203 KKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSAT-GSTIGQVKSSPSNKSAKI 379
+++Q K IKE +Q+K +Q Q ++ SL T+ A+ ST+ V +
Sbjct: 803 QQEQLKEQIKELQEQIKLLQFQQQNLSTASLPTETSPLPASCPSTVPAVTRVTMCTNTGA 862
Query: 380 SLNIGKPGAANRKKLSDNVRIKKGD 454
SL + P N KK + IK +
Sbjct: 863 SLMLSSPIRVNGKKSAATSPIKAAE 887
>SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27)
Length = 228
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +2
Query: 182 KGIFPEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPS 361
K + EPK + K ++ K K +SPK+ +KS T T+ T + K S
Sbjct: 136 KKVTSEPKSPKVKKSKDKSTKTTKKSDAKSPKKDAKSPTTTKKTSKTTKTAAKSPKKSEK 195
Query: 362 NKSA 373
+ A
Sbjct: 196 SSKA 199
>SB_51558| Best HMM Match : DSS1_SEM1 (HMM E-Value=0.2)
Length = 878
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 215 KKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSA-TGSTIGQV--KSSPSNKSAKISL 385
KK+F+++ MK+++Y K K T TNS T TI Q K + NK K
Sbjct: 314 KKSFLEDAMKEMEYGDKGGKGTHGKEAGTNHKTNSIDTNHTITQTAQKLTRPNKEQKTIS 373
Query: 386 NIGK 397
+ K
Sbjct: 374 TVTK 377
>SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13)
Length = 752
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +2
Query: 362 NKSAKISLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELXQMKPVXLQNDDENSSESS 541
N+S K KP ++ + ++ K +++F KRK + + V + D + S
Sbjct: 425 NESEKAEDKNEKPAEPTKEGVPAEAKLSKPRLSKFKKRKADKEHEKVEKKEDKDTSKPLF 484
Query: 542 GHLRDVACXTIESNLSQKLTESTKL 616
G LR A ++ K E+T++
Sbjct: 485 GKLRKKAGDKETNDGEAKQEEATEI 509
>SB_17994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 242 KQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLNIGKPGAANR 415
K + K++P ET++++ ++ N AT I + +NK A I+L KP AN+
Sbjct: 11 KDITKSYKKAPPETTQAIHKENK-NIATKLGIDDGMDTTANKQAFITLKDYKPNFANK 67
>SB_40140| Best HMM Match : SASP_gamma (HMM E-Value=0.36)
Length = 704
Score = 29.1 bits (62), Expect = 3.2
Identities = 26/135 (19%), Positives = 57/135 (42%), Gaps = 4/135 (2%)
Frame = +2
Query: 149 SCSLTINMYTLKGIFPEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATG 328
S S +N I +P+K + ++N+K+ K+ + + + D+ +
Sbjct: 406 SVSNAMNPAQAHDICSKPEKQKNSRKTRKNLKEEKHEKPRDLSRNETITKVHDVKEKSHE 465
Query: 329 STIGQVKSSPSNKSAKIS-LNIGKPG---AANRKKLSDNVRIKKGDMAEFLKRKELXQMK 496
+ KSS SN + ++ K G ++N +D V + G+ E ++ +
Sbjct: 466 TKTLHEKSSKSNNAFILNDQQCSKDGTIASSNSDPQTDTVTNETGNCTELKQKLSHNKSS 525
Query: 497 PVXLQNDDENSSESS 541
++ D+ N+ E+S
Sbjct: 526 NPRVKGDNANAVEAS 540
>SB_36590| Best HMM Match : FGF (HMM E-Value=10)
Length = 208
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 230 KENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSA-KISLNIGKPGA 406
+E+ + L+ ++ QS TSKSLR ++NS T + S P N A K + I KP +
Sbjct: 132 RESRRFLRTLKIQSQNSTSKSLRLPSISNS-TKALFQISYSKPLNFVALKKQMTIEKPRS 190
Query: 407 A 409
A
Sbjct: 191 A 191
>SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
Length = 1347
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 218 KNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGST-IGQVKSSPSNKSAKIS 382
KN +NM Q K Q S ++ S +T+D++ G T ++ PS K IS
Sbjct: 160 KNDKTKNMTQRKTFQSSSTRKLSFENKTKDLSKVKFGETSTNKLDEQPSKKLNNIS 215
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Frame = +2
Query: 206 KDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQD-----MTNSATGSTIGQVKSSPSNKS 370
+D K ++ +K K+ QK++P + +T T+S+T S+ V SSP NK+
Sbjct: 3926 RDLKLAAARKRLK--KFQQKRTPNSSPSVHKTSQNSPVVSTDSSTKSSNSSVPSSPINKT 3983
Query: 371 AKISLN 388
A S N
Sbjct: 3984 ADKSFN 3989
>SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18)
Length = 817
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/77 (25%), Positives = 36/77 (46%)
Frame = +2
Query: 233 ENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLNIGKPGAAN 412
EN+ + +++ P+ET+ S+ + S T +T G+ PS+ S S+N
Sbjct: 493 ENIPRSLESERKQPEETTNSVVPPLLALSRTSNTSGKSSLWPSSSSNPSSVNPPDFQKLK 552
Query: 413 RKKLSDNVRIKKGDMAE 463
+K+S R G A+
Sbjct: 553 TRKISFGPRTLYGSSAQ 569
>SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/32 (43%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +2
Query: 278 ETSKSLRTQDMTNSAT-GSTIGQVKSSPSNKS 370
E S ++ ++ T S++ GSTI +VK++PS+KS
Sbjct: 122 EGSSTISSKSTTESSSAGSTIPRVKTTPSSKS 153
>SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1360
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 242 KQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLNIGKPGAANR 415
K + K++P +T++++ ++ N AT I + +NK A I+L KP AN+
Sbjct: 1028 KDITKSYKKAPPKTTQAIHKENK-NIATKLGIDDRMDTTANKQAFITLKDHKPNFANK 1084
>SB_17998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1089
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 311 TNSATGSTIGQVKSSPSNKSAKISLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELXQ 490
+ S+ G + G ++SP ++ I PG ++ + S + ++GD+ EF + +
Sbjct: 906 SESSRGDS-GSTRTSPIRSTSTIPSTPPPPGGSSSTENSPVLETERGDLIEFYNKVFIKT 964
Query: 491 MKPVXLQ-NDDENSSES 538
+K L+ + + S ES
Sbjct: 965 IKNFALKFSSSDRSLES 981
>SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1478
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +2
Query: 197 EPKKDQKKNFIKENMKQLKYIQKQSPKETSKSL-RTQDMTN-----SATGSTIGQVKSSP 358
E ++ Q N + +L ++S K S+SL R +TN S+ S + +SP
Sbjct: 474 EARQCQLGNTFPDQKIKLVSRSEESGKRRSRSLDRDTSLTNKKKRPSSLPSRVRNKSASP 533
Query: 359 SNKSAKISLNIG 394
S + AK+SL G
Sbjct: 534 STRKAKVSLEAG 545
>SB_20649| Best HMM Match : SpoIIP (HMM E-Value=1.3)
Length = 466
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 242 KQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLNIGKPGAANR 415
K + K++P +T++++ ++ N AT I + +NK A I+L KP AN+
Sbjct: 134 KDITKSYKKAPPKTTQAIHKENK-NIATKLGIDDRMDTTANKQAFITLKDHKPNFANK 190
>SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13)
Length = 969
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -1
Query: 549 RCPDDSEEFSSSFCKXTGFICXSSLRLRNSAMSPFFIRT 433
RC F + C T +C S NS +P+ IR+
Sbjct: 363 RCESRENVFPNVICTRTPSVCASPQTTENSVTNPYAIRS 401
>SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +2
Query: 194 PEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSA 373
PEPK + K +E + K + K SP ++ RTQ + + Q+ + K A
Sbjct: 151 PEPKPETKPEAKQEAKPEAKQVTKPSPIVQEEAPRTQAIPKPGERMSYAQMAAQKGPKPA 210
>SB_26671| Best HMM Match : zf-TRAF (HMM E-Value=0.54)
Length = 901
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 188 IFPEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIG--QVKSSPS 361
+ P P ++ + +K+NM+ L+ + ++SP+ R N+ + G Q S P+
Sbjct: 811 VSPVPARNCVSSPVKDNMRDLRVVVQRSPQAERMKRRAIPTRNARRDISYGDSQSSSEPA 870
Query: 362 NKS 370
++S
Sbjct: 871 SQS 873
>SB_10877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 200 PKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNK 367
PK D + + +QLK K KE + R M ++ S G VK P +K
Sbjct: 184 PKSDMVDDAVSSTNEQLKPEIKSEEKEAVPNPRVIPMVSTIAASGPGLVKPIPEHK 239
>SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2653
Score = 27.5 bits (58), Expect = 9.8
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Frame = +2
Query: 197 EPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAK 376
+PK D +++ E +LK ++SP D SA ++K P N+ +
Sbjct: 1528 KPKPDNRRSATSEENAKLKPDNQRSPISEENDKLKPDNQRSAISEENAKLK--PDNQRSA 1585
Query: 377 ISLNIGKPGAANRKKL--SDNVRIKKGDMAEFLKRKELXQMKPVXLQNDDENSSESSGHL 550
IS K + N++ +N ++ + D +E ++KP N +SE + L
Sbjct: 1586 ISEENAKLMSDNQRSAISEENAKLNQ-DNQRSATSEENAKLKP---DNQSSATSEENAKL 1641
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 27.5 bits (58), Expect = 9.8
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +2
Query: 194 PEPKKDQKKNFIKENMKQL-KYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKS 370
P+ K + + E +K K + K S E+S+ + D T G +KSS S KS
Sbjct: 1024 PDSKNEVLSSRDNEGLKNTQKELNKSSKYESSRDVLRDDKVTE----TNGNIKSSTSPKS 1079
Query: 371 AKISLNIGKPGAANRKKLSDNVRIKK 448
+ R K S NVR+ K
Sbjct: 1080 -----GVPPSEEVERNKYSPNVRMTK 1100
>SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 197 EPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSAT 325
+ +D+KK K + K+ K K K SK +RT ++S T
Sbjct: 112 DDSEDEKKKKKKTSKKRKKSSSKDERKRKSKKIRTVQSSDSET 154
>SB_34292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 868
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 154 TTEFLFKHTLII*IPTNSTRFINIQR 77
TTE FKH ++ P ++RFI + R
Sbjct: 184 TTEVQFKHPFLLPPPVRASRFIELSR 209
>SB_11988| Best HMM Match : Ank (HMM E-Value=5.1e-32)
Length = 639
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 215 KKNFIKENMKQLKYIQKQSPK--ETSKSLRTQDMTNSA 322
+KN + N K LK +Q++SPK ET TQ N+A
Sbjct: 233 EKNINETNTKYLKPLQEKSPKCDETKNHEETQFCKNTA 270
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/90 (20%), Positives = 35/90 (38%)
Frame = +2
Query: 194 PEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSA 373
P KK + + Q + + +T+ + N++ +T K + +N S
Sbjct: 3086 PNHKKSTRPTTDNKQQSQPQTTTAEPITKTTSTTAKPTTNNNSKPTTNNNSKPTTNNNSK 3145
Query: 374 KISLNIGKPGAANRKKLSDNVRIKKGDMAE 463
+ N KP N+K +N K ++ E
Sbjct: 3146 PTTNNNSKPTTNNKKVNLNNTNKKDSELTE 3175
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,496,161
Number of Sequences: 59808
Number of extensions: 341850
Number of successful extensions: 1258
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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