SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_M19
         (425 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    75   6e-13
UniRef50_Q1YKB3 Cluster: Putative uncharacterized protein; n=1; ...    33   3.3  
UniRef50_A6T4D8 Cluster: Alpha-hemolysin; n=5; Bacteria|Rep: Alp...    33   3.3  
UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1; Gr...    32   4.3  
UniRef50_UPI000155C727 Cluster: PREDICTED: similar to laminin be...    31   7.5  
UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1...    31   7.5  
UniRef50_Q0U1R0 Cluster: Predicted protein; n=1; Phaeosphaeria n...    31   7.5  
UniRef50_A5AL10 Cluster: Putative uncharacterized protein; n=1; ...    31   9.9  
UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12...    31   9.9  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 74.9 bits (176), Expect = 6e-13
 Identities = 33/58 (56%), Positives = 40/58 (68%)
 Frame = +1

Query: 136 IYGTGGLLTPLVAPVLXXXXXXXXXXXXXXXXXXYYGNLVAGSIVSQLTAAAMVAPTP 309
           IYGTGGLLTP+VAP+L                  YYGN+VAGS++SQLT+AAM+APTP
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSVISQLTSAAMLAPTP 74


>UniRef50_Q1YKB3 Cluster: Putative uncharacterized protein; n=1;
           Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
           protein - Aurantimonas sp. SI85-9A1
          Length = 215

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
 Frame = +3

Query: 90  GASXCISGKRGRRCCNIWHWGSVDSISGSRARFQLSGNS-GRKHSRCCTSILRKFSGR-Q 263
           G      G  GR+        +    +G R+  + SGN  G+   R C     +  GR Q
Sbjct: 45  GEQSLAPGNSGRQITGKQKRSNNGQEAGQRSEPRHSGNERGKAEQRWCVDESNRRGGRSQ 104

Query: 264 HCVTVDCCCHGSPH 305
            CV     CHGSP+
Sbjct: 105 LCVAAAMRCHGSPN 118


>UniRef50_A6T4D8 Cluster: Alpha-hemolysin; n=5; Bacteria|Rep:
           Alpha-hemolysin - Janthinobacterium sp. (strain
           Marseille) (Minibacterium massiliensis)
          Length = 86

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +3

Query: 21  FLNQHSSFYTCAIARREQKLKEHGASXCISGKRGRRC-CNIWHWGSVDSI 167
           FL Q+  FY    +   + L+EHGA         R C C+ WH G VD +
Sbjct: 19  FLGQNCRFYPSCSSYAIEALEEHGALKGSFLATKRLCKCHPWHAGGVDPV 68


>UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1;
           Granulibacter bethesdensis CGDNIH1|Rep: Hypothetical
           cytosolic protein - Granulobacter bethesdensis (strain
           ATCC BAA-1260 / CGDNIH1)
          Length = 90

 Score = 32.3 bits (70), Expect = 4.3
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +3

Query: 72  QKLKEHGA--SXCISGKRGRRCCNIWHWGSVDSISGSRAR 185
           Q L+EHG      ++G+R  RC N WH G  D +   R R
Sbjct: 42  QALREHGTFQGSMLAGRRILRC-NPWHQGGYDPVPAGRCR 80


>UniRef50_UPI000155C727 Cluster: PREDICTED: similar to laminin beta
            2-like chain; n=1; Ornithorhynchus anatinus|Rep:
            PREDICTED: similar to laminin beta 2-like chain -
            Ornithorhynchus anatinus
          Length = 1850

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -3

Query: 297  YHGSSSQL*HNAAGH*ISVVCLCSSGCASCRYSR 196
            YHGSS Q    A GH   +VCLC+ G A  R  R
Sbjct: 943  YHGSSCQ----ADGHTGQIVCLCAPGYAGSRCDR 972


>UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1;
            n=2; Caenorhabditis|Rep: Laminin related. see also
            lmb-protein 1 - Caenorhabditis elegans
          Length = 1067

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +3

Query: 102  CISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGN 203
            C SG +G RC  C   HWGS   + G+  R   +GN
Sbjct: 974  CKSGYQGERCGECAQNHWGSPREVGGTCERCDCNGN 1009


>UniRef50_Q0U1R0 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 82

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +3

Query: 204 SGRKHSRCCTSILRKFSGRQHCVTVDCCCHGSP 302
           SG     C       F G  HCV+  CCC+G P
Sbjct: 36  SGTYQIACVECPCDGFDGPCHCVSDGCCCNGGP 68


>UniRef50_A5AL10 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 495

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 120 GRRCCNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSILRKFSGRQH 266
           G RC  IW W ++     S A+ +L   SG  H R   S L++   R+H
Sbjct: 334 GSRCSRIWVWRNI-----SAAQLRLGRXSGLPHRRKKXSALQQILHREH 377


>UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12;
           Bacilli|Rep: Pyrrolidone-carboxylate peptidase -
           Bacillus subtilis
          Length = 215

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 57  IARREQKLKEHGASXCISGKRGRRCCNIWHWGSVDSIS 170
           + R   K+KEHG    +S   G   CN   +G +D IS
Sbjct: 119 VKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHIS 156


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,743,116
Number of Sequences: 1657284
Number of extensions: 6805274
Number of successful extensions: 14286
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14280
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -