Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_M17
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    24   0.94 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.2  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   8.7  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 115 CAGARACPDGSSNGTC 162
           C G + C DGS   TC
Sbjct: 136 CNGEKDCSDGSDENTC 151


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 148 SNGTCVTQVGGY 183
           +NGTC+ +VGG+
Sbjct: 271 NNGTCLDKVGGF 282


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 317 FGX*CGTCELLHCIKPDSSAERHPAV 240
           FG   GT E L C +     ER P +
Sbjct: 66  FGCLVGTPETLRCQREGFFHEREPCI 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,757
Number of Sequences: 336
Number of extensions: 1657
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)