Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_M17
         (649 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0398 + 16706262-16706606                                         34   0.085
10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247           30   1.8  
12_02_1284 + 27548813-27549826                                         29   4.2  
06_01_0027 - 271199-271424,271628-272095,272721-273018,273133-27...    28   7.4  
04_01_0236 - 3069062-3069625,3070339-3070386                           28   7.4  
11_08_0048 - 28022335-28022520,28022607-28022699,28022804-280228...    27   9.7  
04_04_0733 + 27639581-27641257                                         27   9.7  
02_05_1048 + 33748260-33748433,33748886-33748978,33750174-337503...    27   9.7  

>08_02_0398 + 16706262-16706606
          Length = 114

 Score = 34.3 bits (75), Expect = 0.085
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -3

Query: 620 QSFGRVXASQSPTPEDISEHIGGAGGDXGLLQPRLRG 510
           +S G + A ++  PED  E  GG GGD  ++  R+RG
Sbjct: 57  RSTGEIPARRNGRPEDSGEAGGGVGGDTAVVSGRIRG 93


>10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247
          Length = 722

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 250 CLSADESGLMQCKSSQVPHXHPKVIECCYDDDLCNLRLH-PQLSEPSP 390
           C++A  S    CK S     +P + + C D D C LR+  P+L +  P
Sbjct: 299 CVNATSSPGYICKCSDHYDGNPYIADGCQDIDECQLRIQFPELRDVYP 346


>12_02_1284 + 27548813-27549826
          Length = 337

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +1

Query: 340 DDLCNLRLHPQLSEPSPD--VTXSPGVRPPITSSPT 441
           DD C+ R   QL+  +PD  V  +P  RP + + PT
Sbjct: 130 DDHCHARTLAQLAAAAPDLPVVTTPNARPVLAALPT 165


>06_01_0027 -
           271199-271424,271628-272095,272721-273018,273133-273343,
           273427-274124,274921-274969,276059-276112,276244-276275,
           276319-276484,276563-276628,276717-276812,276868-276957,
           277302-277398,277496-277575,277709-277753,278006-278134,
           278593-278722,278888-279222,279918-280053,280149-280328,
           280422-280679,280752-281137
          Length = 1409

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +1

Query: 124 ARACPDGSSNGTCVTQVGGYCFVAVEEVLDXSGSVVLDRTAGCLSADESG 273
           +R C +G+    C+ ++ G C  +  E+L  S         G ++ ++SG
Sbjct: 736 SRYCYEGADEEDCIIEMDGRCLYSSIELLIESAGCSSVAAVGVMAKEQSG 785


>04_01_0236 - 3069062-3069625,3070339-3070386
          Length = 203

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
 Frame = +1

Query: 115 CAGARACPDGSSNG-----TCVTQVGGY-CFVAVEE---VLDXSGSVVLDRTAGCLSADE 267
           C G R C  G S G     T + Q G   C   +++   +L   GS    R+ GC S+  
Sbjct: 24  CGGRRRCRGGGSPGRVTISTYLMQEGAVSCTYLIQDFRLLLTGLGSS-RSRSTGCWSSTS 82

Query: 268 SGLMQCKSSQVPHXHPKVIECCYDDDL 348
           S  MQ  S ++      V EC   DDL
Sbjct: 83  SNSMQDPSPEIHPADGGVAEC---DDL 106


>11_08_0048 -
           28022335-28022520,28022607-28022699,28022804-28022882,
           28022951-28023061,28023133-28023390,28023468-28023970,
           28024094-28024729,28024778-28025116
          Length = 734

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 382 PSPDVTXSPGVRPPITSSPT 441
           P P V   PG  PP+ S PT
Sbjct: 298 PEPPVASPPGSEPPVASPPT 317


>04_04_0733 + 27639581-27641257
          Length = 558

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 340 DDLCNLRLHPQLSEPSPDVTXSPGVRPPITSS 435
           DDL  L   P L  P P +  S    PP+ +S
Sbjct: 423 DDLVPLSFRPMLDAPEPALDLSIAANPPLLAS 454


>02_05_1048 +
           33748260-33748433,33748886-33748978,33750174-33750371,
           33750502-33750675,33750769-33750875,33751233-33751564,
           33751654-33752147
          Length = 523

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +1

Query: 226 VVLDRTAGCLSADESGLMQCKSSQVPHXHPKVIECCYDDDLCNLRLHPQL 375
           V  D T G  S     ++QC+SS +     K+I+C  D  L  L L P +
Sbjct: 236 VASDFTGGQASIKRRHILQCQSSLLSKNFEKLIQC--DQRLNYLSLQPYM 283


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,096,932
Number of Sequences: 37544
Number of extensions: 240900
Number of successful extensions: 907
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)