Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_M17
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23511-3|AAC46790.1| 636|Caenorhabditis elegans Small protein 6... 49 2e-06
AF104017-1|AAD12261.1| 636|Caenorhabditis elegans serine-threon... 49 2e-06
Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical pr... 31 0.93
AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical ... 31 0.93
AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical... 29 3.8
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 28 6.6
Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical p... 27 8.7
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 27 8.7
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 8.7
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 8.7
>U23511-3|AAC46790.1| 636|Caenorhabditis elegans Small protein 6
protein.
Length = 636
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +1
Query: 148 SNGTCVTQVGGYCFVAVEEVLDXSGSVVLD-RTAGCLSADE-SGL--MQCKSSQVPHXHP 315
+N TCV Q G C+ AVEEV + + + GC + + SG + C S + H P
Sbjct: 79 NNMTCVKQDGAACYHAVEEVYNKAEKRMETLHKWGCATLERGSGASHLTCNSWRAAHHSP 138
Query: 316 KVIECCYDDDLCNLRLHP 369
K I CCY+ + CN L P
Sbjct: 139 KSIGCCYEGNYCNKNLIP 156
>AF104017-1|AAD12261.1| 636|Caenorhabditis elegans serine-threonine
kinase SMA-6 protein.
Length = 636
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +1
Query: 148 SNGTCVTQVGGYCFVAVEEVLDXSGSVVLD-RTAGCLSADE-SGL--MQCKSSQVPHXHP 315
+N TCV Q G C+ AVEEV + + + GC + + SG + C S + H P
Sbjct: 79 NNMTCVKQDGAACYHAVEEVYNKAEKRMETLHKWGCATLERGSGASHLTCNSWRAAHHSP 138
Query: 316 KVIECCYDDDLCNLRLHP 369
K I CCY+ + CN L P
Sbjct: 139 KSIGCCYEGNYCNKNLIP 156
>Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 103 LRCXCAGARACPDGSSNGTCVTQVGGYCFVAVEEVLDXSGSVVLDRTA--GCLSADESGL 276
++C C+GA D + G T V + VE+ + +++R A C++ +G
Sbjct: 120 IQCVCSGAHCKNDKTCVGELCTFVENHVTEQVEQGCTNASVPLIERRAIGSCMAPPITGA 179
Query: 277 MQCKSSQVPHXHPKVIECCYDDDLCN 354
M ++ H V C D CN
Sbjct: 180 MHHTVAKDAHSLLGVESCICGTDYCN 205
>AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 103 LRCXCAGARACPDGSSNGTCVTQVGGYCFVAVEEVLDXSGSVVLDRTA--GCLSADESGL 276
++C C+GA D + G T V + VE+ + +++R A C++ +G
Sbjct: 120 IQCVCSGAHCKNDKTCVGELCTFVENHVTEQVEQGCTNASVPLIERRAIGSCMAPPITGA 179
Query: 277 MQCKSSQVPHXHPKVIECCYDDDLCN 354
M ++ H V C D CN
Sbjct: 180 MHHTVAKDAHSLLGVESCICGTDYCN 205
>AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical
protein W03F9.4 protein.
Length = 746
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 118 AGARACPDGSSNGTCVT 168
AG ACPDGS+ G C T
Sbjct: 683 AGGFACPDGSNYGVCYT 699
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1
Query: 115 CAGARACPDGSSNGTCVTQVGGYCFVAVEEVLDXSGSVVLDRTAGCLS-ADESGLMQCK 288
C G CPDGS +C ++ F SV D + C + +DES +C+
Sbjct: 197 CNGVENCPDGSDEASCRSKCSKDQFKCSGSDACLPISVKCDGVSDCENESDESNCNKCQ 255
>Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical
protein R07B1.8 protein.
Length = 425
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/90 (20%), Positives = 31/90 (34%)
Frame = +1
Query: 157 TCVTQVGGYCFVAVEEVLDXSGSVVLDRTAGCLSADESGLMQCKSSQVPHXHPKVIECCY 336
+CV G + A +++ + T L ES C H K+ + C+
Sbjct: 11 SCVQLTTGQFYCA--DLIQQCAKSAAEYTEQILQYKESAFKSCVRRPACHTERKIFDECF 68
Query: 337 DDDLCNLRLHPQLSEPSPDVTXSPGVRPPI 426
D + + P S D +PP+
Sbjct: 69 DASVSATHISPPQESTSNDGETRKVTQPPM 98
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 235 DRTAGCLSADESGLMQCKSSQVPH 306
DR+A C+ DES + C+S + H
Sbjct: 1036 DRSARCIDTDESYICACQSGFIDH 1059
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 235 DRTAGCLSADESGLMQCKSSQVPH 306
DR+A C+ DES + C+S + H
Sbjct: 1620 DRSARCIDTDESYICACQSGFIDH 1643
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 235 DRTAGCLSADESGLMQCKSSQVPH 306
DR+A C+ DES + C+S + H
Sbjct: 1036 DRSARCIDTDESYICACQSGFIDH 1059
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 235 DRTAGCLSADESGLMQCKSSQVPH 306
DR+A C+ DES + C+S + H
Sbjct: 1620 DRSARCIDTDESYICACQSGFIDH 1643
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 235 DRTAGCLSADESGLMQCKSSQVPH 306
DR+A C+ DES + C+S + H
Sbjct: 1620 DRSARCIDTDESYICACQSGFIDH 1643
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,081,551
Number of Sequences: 27780
Number of extensions: 170460
Number of successful extensions: 572
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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